Pairwise Alignments

Query, 442 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

Subject, 440 a.a., ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis from Pseudomonas putida KT2440

 Score =  300 bits (767), Expect = 8e-86
 Identities = 175/421 (41%), Positives = 241/421 (57%), Gaps = 12/421 (2%)

Query: 6   FSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLLPVLQH 65
           FS+  L E LL A+    F  PT +QAAAIP AL+GRD+  +A TG+GKTAA++LP+L  
Sbjct: 2   FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 61

Query: 66  LLDFPRKKSGPP---RILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHAEV 122
           L+D     SGP    R LIL PTRELA Q     +  +  T++    +TGG  +   A +
Sbjct: 62  LVDL----SGPRVEIRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAM 117

Query: 123 FSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRN 182
             +  D+++ T GRLL+ +   N D   V+ LILDEADRMLDMGFA+D+E +  E   R 
Sbjct: 118 LRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENRE 177

Query: 183 QTMLFSATLEGEAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLKHL 242
           QT+LFSAT  G A++D   ++L+DP  +     ++  +   Q    AD+ +HK ++ + L
Sbjct: 178 QTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHDQHKEQIAQWL 237

Query: 243 LKQEDALRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQIKRTEGIKRLTDGRVNVL 302
           L  E   + I+F   R     +   L    +    L GE  Q  R   I+R   G   VL
Sbjct: 238 LANETFDKAIIFTNTRAMADRIYGHLVAKDVKAFVLHGEKDQKDRKLAIERFKQGSSKVL 297

Query: 303 VATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLLQK 362
           VATDVAARG+DI  +  VINFDMPRSGD Y+HR+GRTGRAG +G+AISL+  +D+ L+  
Sbjct: 298 VATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLITHNDWNLMSS 357

Query: 363 IGRYVDEPLKARVIDELRPTTRAP-----SEKMTGKPSKKALAKRAERKEKEKEKPRVKQ 417
           I RY+ +  + RVI E++ T   P     S K  G   KK   K  ++K   K KP  K 
Sbjct: 358 IERYLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTGDKKAAAKRKPTAKP 417

Query: 418 R 418
           +
Sbjct: 418 K 418