Pairwise Alignments

Query, 611 a.a., ATP-dependent DNA helicase RecQ from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

 Score =  554 bits (1427), Expect = e-162
 Identities = 283/600 (47%), Positives = 403/600 (67%), Gaps = 4/600 (0%)

Query: 15  AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 74
           A++VL++ FGY  FR  Q  II+ V SG D LV+MPTGGGKSLC+Q+PALL NGL VVVS
Sbjct: 5   AQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVS 64

Query: 75  PLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFL 134
           PLI+LM DQV  L+  GVAAA LNST + EQQ ++    + G++++LY+APERL+    L
Sbjct: 65  PLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRML 124

Query: 135 EHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDI 194
             L      L A+DEAHC+SQWGHDFR EY  LGQL + FP +P +ALTATAD  TR++I
Sbjct: 125 AFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEI 184

Query: 195 VRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDT 254
           V  L L +    +SSFDR NI Y ++ K +P  QL+ ++ E+R  +GI+YC SR KV++ 
Sbjct: 185 VERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEV 244

Query: 255 AARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 314
           AA L  +G  A  YHAGL N++RA  Q++F  ++  I+VAT+AFGMGI+K NVRFV H D
Sbjct: 245 AAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMD 304

Query: 315 IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL-QDIERHKLNAM 373
           +P+++E+YYQETGRAGRDGLPA+A + Y   D+  L++ L+     +  + +E+HKL+AM
Sbjct: 305 LPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAM 364

Query: 374 GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFG 433
            +  E   CRR  LL YF E   EPCG+CD C+D  + +D +  A+  LS I R  QR+G
Sbjct: 365 LSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQRYG 424

Query: 434 MGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSA 493
           +G++V+V+ G +N+++R +GH+KL VYG+G+ ++   W S+ RQ++  GLV  +I     
Sbjct: 425 VGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGFGG 484

Query: 494 LQLTEAARPVLRGESSLQL---AVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIAD 550
           L+L ++ RP+L+GE SL+L     P+  A    +         +R+ +  LR LR+ +A 
Sbjct: 485 LRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRGEEREQWEALRTLRRKLAQ 544

Query: 551 ESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDE 610
           E +VPPYV+F D+TL+EM  + P + +EM  V+GVG RKLER+G+ F+ ++    +   E
Sbjct: 545 EHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVLGGQAEAPKE 604