Pairwise Alignments

Query, 928 a.a., DNA polymerase I from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  812 bits (2098), Expect = 0.0
 Identities = 460/940 (48%), Positives = 605/940 (64%), Gaps = 31/940 (3%)

Query: 10  ILVDGSSYLYRAYHA-----FPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64
           +LVDGSSYLYRA+ A        L +     TGA+  ++NM++ L    +  +AA VFDA
Sbjct: 1   LLVDGSSYLYRAFFAGGEAMSTTLPDGTVLKTGAIRIMINMMQKLRKDVRADYAACVFDA 60

Query: 65  KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124
           KG TFRD L+  YK++R PMPDDLRAQI P+H +VK +G  +L V GVEADDVIGTLA  
Sbjct: 61  KGPTFRDALYPEYKANRSPMPDDLRAQIAPIHEVVKLLGWKVLDVPGVEADDVIGTLAHL 120

Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184
           A + G   +IS+GDKD++QLV  +IT+I+TM +       V  ++GVPP L++D+  L+G
Sbjct: 121 AAQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRRRDVAGVTAEFGVPPSLMLDYQTLVG 180

Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244
           D  DN+PGVP VG KTA   LQ  G L+ L A   +I G +    +     L + +E   
Sbjct: 181 DQVDNVPGVPKVGPKTAVKWLQEYGSLEALVARAGEIKGAAGENLRNALDWLPKGRE--- 237

Query: 245 LSYQLATIKTDVELE------LTCEQLEVQQPAAEELLGLFKKYEFKRWTA-----DVEA 293
               L TIK D +L+       + E + +    +E L    + Y FK         DV  
Sbjct: 238 ----LLTIKIDCDLQDHIEGLPSLEAITIAGQDSEALKAFGETYGFKGLVKSLTQHDVPP 293

Query: 294 GKWLQAK---GAKPAAKPQETSVADEAPEVTATVISYDN--YVTILDEETLKAWIAKLEK 348
            +  ++K    AK  A      + DE P+++ +     N  Y T+L  +   +W+ +L+ 
Sbjct: 294 ERIEESKVKAAAKGKAGDGSPGLFDE-PDLSGSAERTTNLRYDTLLTWDQFDSWLQRLQA 352

Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPL 408
           A + A DTET SLD + A +VG+SF++ PG AAYIP+ H   +AP+Q+  +  L  LKP 
Sbjct: 353 AELVALDTETTSLDEMRAEIVGISFSVTPGEAAYIPLRHAGPEAPEQLPFDEVLAKLKPW 412

Query: 409 LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKH 468
           LED    K+GQ++KYDR + AN+GIE++G   DTML+SY+L  V   H + SLAER L  
Sbjct: 413 LEDPAKHKLGQHMKYDRHVFANHGIEVQGYVHDTMLQSYVLE-VHKPHGLASLAERHLGR 471

Query: 469 KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN 528
           + I +E++ GKG +Q+ F Q+ + +A  Y+ ED+D TL +H  +WP LQ  +    ++E 
Sbjct: 472 QGINYEDLCGKGAHQIPFAQVEVAKAAEYSCEDSDQTLDVHRVLWPQLQADEKLRFIYE- 530

Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588
           +E+     L RIERNGV ID   L   S EL  R+  LE++A+ IAG+ FNL S KQL  
Sbjct: 531 LEIASSEALYRIERNGVLIDAPTLAAQSHELGQRIVALEQEAYAIAGQPFNLGSPKQLGE 590

Query: 589 ILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648
           I F+K G+  +KKT  GA ST EEVLE+LA DYPLP  ILE+R LAKLK TYTDKL  + 
Sbjct: 591 IFFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAKILEHRSLAKLKGTYTDKLAQLA 650

Query: 649 NPKTRRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708
            P+T RVHT Y QAV  TGRLSS DPNLQNIP+R  EGRR+R+AF+AP   VI SADYSQ
Sbjct: 651 LPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGSVIASADYSQ 710

Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768
           IELRIMAH+S D+ LL AF EG D+HRATAAEVFG+    V+SEQRR AK INFGLIYGM
Sbjct: 711 IELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGVETAQVSSEQRRYAKVINFGLIYGM 770

Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828
            +FGLA+ L I    A+ Y+  YFER+ GV  YM+ TR +AK+ GY+ET+ GRRL LPDI
Sbjct: 771 GSFGLAKALGIDNTAAKNYITRYFERFEGVKRYMDETRQRAKDMGYIETVFGRRLVLPDI 830

Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888
           K++ GA+ +A ER AINAPMQGTAAD+IK +M+AV   L  ++   +MIMQVHDELVFEV
Sbjct: 831 KNAKGAKLSALERQAINAPMQGTAADLIKLSMVAVQKALDEQRRSTKMIMQVHDELVFEV 890

Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928
            + +VD +  +I  LM     L VPLL EVG G NWD+AH
Sbjct: 891 PEGEVDWLKTEIPHLMAGVAALKVPLLAEVGVGPNWDKAH 930