Pairwise Alignments

Query, 928 a.a., DNA polymerase I from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 937 a.a., DNA polymerase I from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  731 bits (1886), Expect = 0.0
 Identities = 427/949 (44%), Positives = 584/949 (61%), Gaps = 49/949 (5%)

Query: 9   LILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66
           L L+D  + +YRA+ AF   P  NS G  TG M G  N L  +I +  P+H AV FD   
Sbjct: 9   LFLLDAMALIYRAHFAFSKNPRINSKGLNTGIMLGFTNTLLEVIEKQSPSHIAVAFDTAA 68

Query: 67  KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126
            TFR E FE YK++R   P+D+   I  +  +V    +P+L + G EADD+IGT+A++AE
Sbjct: 69  PTFRHEQFEAYKANRQEQPEDITVGIPWVKQIVDGFNIPILELDGYEADDIIGTIAKKAE 128

Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINT--MTNTI--LGPEEVVNKYGVP-PELIIDFLA 181
                V + T DKD  QLV  +I L     M N +  +GP+EV  K+ +  P+ + D L 
Sbjct: 129 YKDFEVYMMTPDKDYGQLVEEHIFLYKPAFMGNAVDVMGPKEVCAKWEIEDPDQVRDILG 188

Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241
           LMGD+ DNIPG+PG+GEKTA+ LL+  G ++ L      + G            +E   +
Sbjct: 189 LMGDAVDNIPGIPGIGEKTAKKLLKAYGTIEGLLEHVGDLKG-------KQKENVENFGQ 241

Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301
              LS  LATIK DV +E   E L    P  E+L  LF + EF+  T  V   K      
Sbjct: 242 QGLLSKSLATIKQDVPIEFNPEDLTYDGPDEEKLKALFAEMEFRTLTQRVFGEKM----- 296

Query: 302 AKPAAKPQE-----TSVADEA-------------PEVTATVISYDN-YVTILDEETLKAW 342
            KPA K  E     T  A++A             P+  ATV S  + Y  +     +K  
Sbjct: 297 KKPAVKVNEQLGLFTGPAEDAEEEEVEEANPIPVPDQLATVTSMVHAYHKVEGLAAIKEL 356

Query: 343 IAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERAL 402
           +  LE    F FDTET  LD   A LVGLSFA  PG A YIPV        DQ   ++ L
Sbjct: 357 VEYLEIQDEFCFDTETTDLDPNKAELVGLSFAYVPGEAFYIPVP------ADQEETKKLL 410

Query: 403 ELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLA 462
           E L+ + EDE   K+GQN+KYD  +L NYGI L+G  +DTML  Y++    G+H+MD LA
Sbjct: 411 EPLRGVFEDESITKIGQNIKYDALVLKNYGIALKGKLYDTMLAHYLIEP-EGKHNMDWLA 469

Query: 463 ERWLKHKTITFEEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521
           E +L+++ ++ E + GK GK+Q       +++   YA+EDAD+TLQL  K+ PDL K +G
Sbjct: 470 EHYLQYRPVSIETLIGKKGKSQGNMRDADVDKVVEYASEDADITLQLAQKLNPDL-KERG 528

Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581
              +F  +E PL+PVL+ +E  GVKID + L   S  L   + E+E + +++AG +FNL+
Sbjct: 529 LEKLFYEVETPLIPVLTAMEYEGVKIDKESLAELSTALEKDITEIEARVYDLAGVKFNLA 588

Query: 582 STKQLQTILFEKQGIKP-LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640
           S KQL  +LF K  + P  KKT  G  +T EEVL +LA  + + + IL+YR L KLK+TY
Sbjct: 589 SPKQLGEVLFVKMELDPKAKKTKTGQYATGEEVLSKLAPKHEIARAILDYRELVKLKNTY 648

Query: 641 TDKLPLMINPKTRRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-Y 699
            D LP +INPKT R+HT+Y+Q V ATGRLSS +PNLQNIP+R E GR IR+AF+  ++ +
Sbjct: 649 VDTLPTLINPKTDRIHTTYNQVVAATGRLSSINPNLQNIPIRTERGREIRKAFVPRDEAH 708

Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759
           VI++ADYSQIELRIMA  S+D+ ++ AF EG+DIH  TAA++F +PLE VTSE RR AK 
Sbjct: 709 VILAADYSQIELRIMAAFSKDESMMEAFREGRDIHSTTAAKIFQVPLEEVTSEMRRKAKT 768

Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819
            NFG+IYG+SAFGL+++LNIPR EA++ +D YF+ +P V +YM     +A++  YVET+ 
Sbjct: 769 ANFGIIYGISAFGLSQRLNIPRGEAKEIIDAYFKEFPAVSQYMNDCIEKARKNEYVETIL 828

Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879
           GRR YL DI S N   R  +ER AINAP+QG+AAD+IK AMI V  W+  +Q + +MI+Q
Sbjct: 829 GRRRYLRDINSRNATMRGYSERNAINAPIQGSAADMIKVAMIHVHQWMLEKQLKSKMILQ 888

Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928
           VHDELVF+ HKD+VD + K+I +LM     ++VP+ VEVG G++W +AH
Sbjct: 889 VHDELVFDAHKDEVDLLKKEIPKLMTKALEIEVPMQVEVGVGKDWLEAH 937