Pairwise Alignments

Query, 732 a.a., 'Primosomal protein N'' transl_table=11 from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 739 a.a., primosome assembly protein from Pseudomonas putida KT2440

 Score =  684 bits (1765), Expect = 0.0
 Identities = 369/738 (50%), Positives = 474/738 (64%), Gaps = 14/738 (1%)

Query: 3   VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNE 59
           +  +ALP PL R FDY  P  M   T+  G R+RVPFG++ E IGV++ V   SE+P ++
Sbjct: 5   ILRLALPSPLRRLFDYKAPASMARLTLTPGMRIRVPFGRR-EMIGVLIEVCTQSEVPADK 63

Query: 60  LKAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119
           LK    +LD       S+++L LW A YY H +GD L  ALP LLRQG  A      +W 
Sbjct: 64  LKPASALLDPVSPIPASLFKLCLWTAQYYQHSLGDTLSWALPTLLRQGEAAEMRQERFWH 123

Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCDLA 177
               G  ++   + R+P+Q+ AL  L Q    +    +A L  N  +L  L  K L  + 
Sbjct: 124 IAP-GARLEDPRIARAPRQRDALKTLAQHPHGVAHSLLAKLNLNKDSLDLLLAKDLVQIE 182

Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237
           +        R  + ++   L LN EQ  A  A+      F A+LLAGVTGSGKTEVYL +
Sbjct: 183 TRR-HLPALRHEHWLAQPELPLNEEQREAFDAVCEGFGGFGAFLLAGVTGSGKTEVYLQL 241

Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297
           +   L  GKQALV++PEI L PQT+ARF +RFNA + +LHS +ND ERL AWL A++GEA
Sbjct: 242 IRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGEA 301

Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357
            I+IGTRSALFTP KN G+I+IDEEHD SYKQQEG RYHARDLA+ RAH E IPI+LGSA
Sbjct: 302 DIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRAHQENIPILLGSA 361

Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417
           TP+LETL N    +YRLLR+ +RAG ARP     LD+K   + +G++  L   +RQ L+A
Sbjct: 362 TPSLETLHNALTGRYRLLRMNQRAGGARPPRMLRLDVKSLPLDSGISGPLQQAIRQTLEA 421

Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477
             QV++FLNRRGFAP LLCHDCGW++ECPRCD   T+HQ    LRCHHC     +P QCP
Sbjct: 422 GQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARMTVHQRSGVLRCHHCGYDERLPHQCP 481

Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537
            C    L PVG GTE+ E+ L  LFP  PI R+DRD+T+RK A+    + + RG   IL+
Sbjct: 482 QCNHVDLRPVGAGTERAEERLKVLFPDYPILRVDRDSTARKDAMHNLFSTIQRGQPSILV 541

Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597
           GTQMLAKGHHFP VTLVA+LD DG LFS DFR++ER AQL  QVAGRAGRA + G+V++Q
Sbjct: 542 GTQMLAKGHHFPRVTLVAILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVIIQ 601

Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ-- 655
           TH  +HPLL  L  +GY AFAEQAL ERR   LPP++   ++RAE H    A  FL +  
Sbjct: 602 THLADHPLLVQLTEQGYFAFAEQALDERRAAGLPPYSHLALLRAEAHKPGQAEGFLDEAC 661

Query: 656 --LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713
                L+    L   +L  LGPVPA   +R GR+R Q+L+Q  +R  L  +I+  L ++ 
Sbjct: 662 AAAERLVAEQRLPGIEL--LGPVPAPMERRAGRFRAQLLIQANTRAPLHRLISAWLLVLE 719

Query: 714 TIPDSRKVKWVLDVDPIE 731
            +P  R+V+W LDVDP++
Sbjct: 720 QLPSGRQVRWSLDVDPVD 737