Pairwise Alignments

Query, 528 a.a., putative cyclic di-GMP phosphodiesterase PdeC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens GW456-L13

 Score =  160 bits (404), Expect = 3e-43
 Identities = 92/239 (38%), Positives = 140/239 (58%), Gaps = 8/239 (3%)

Query: 275  LQRALEKHQLCLYYQPIIDIKTEKCIGAEALLRWLGEQGQIMNPAEFIPLAEKEGMIEQI 334
            L+ ALE+++  LYYQP      ++  GAEALLRW   +  ++ P +FIP+ E+ G++  +
Sbjct: 1006 LRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDV 1065

Query: 335  TDYVIDNVFRDLGDYLATHADRY----VSINLSASDFHTSRLIARINQKTEQYAVRPQQI 390
             D+VI    R L    A H  R     VS+N+SA  F   +L  RI    ++  + P  +
Sbjct: 1066 GDWVISEACRQLK---AWHQARVRVPKVSVNISARQFSDGQLGTRIATILKETGLPPACL 1122

Query: 391  KFEVTEHAFL-DVDKMTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFV 449
            + E+TE   + +V +   I+   +  G  +A+DDFG GYS+L+ LK   +D+LKID++FV
Sbjct: 1123 ELELTESILMREVSEAMQILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFV 1182

Query: 450  ETLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMP 508
            + L + +    IA  II +AHSL L  IAEGVET EQ+++LR+ G    QG+ F + MP
Sbjct: 1183 DGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMP 1241