Pairwise Alignments

Query, 229 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 887 a.a., hypothetical protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 24/203 (11%)

Query: 28  KAAEAGDRRAQYFLADSWFSS----GDLSKAEYWAQKAADSGDADACALLAQIKIT-NPV 82
           +AA+     AQ  LA ++        D  +A  WA+KAAD+G+  A AL+  + +  + V
Sbjct: 258 QAAQQQVAAAQSVLASAYMLGLGVRQDARQALEWARKAADAGEGSAQALIGTLYLEGSGV 317

Query: 83  SLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAV 142
             D  QA     KA + G+  G+  L  +         D  +A  L   A++        
Sbjct: 318 DKDLGQAVSWFRKAVEGGNPMGQWALGRLYATGVGVAKDETEAARLFREAAD----QGLA 373

Query: 143 DAQMLLGLIYANGVGIKADDDKATWYFKRSS------AISRTGYSEYWAGMMFLNGEEGF 196
           +AQ  LG   A+G G+  D+ +A  +++R++      A +  GY  YW G+         
Sbjct: 374 EAQAELGTALADGRGVAKDEAEAVRWYRRAAEQGHVEAQNDLGY-RYWEGL--------G 424

Query: 197 IEKNKQKALHWLNLSCMEGFDTG 219
           +E++  +A+HW   S   G  TG
Sbjct: 425 VERDVAQAVHWFRKSAATGDATG 447



 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 19/206 (9%)

Query: 27  LKAAEAGDRRAQYFLADSWFSS----GDLSKAEYWAQKAADSGDADACALLAQIKITNPV 82
           L AAE GD  AQ+ LA ++ S      D  KA  W +++AD G   A   +         
Sbjct: 42  LDAAEQGDAEAQWRLAHAYQSGYGTRKDARKAAQWMRRSADQGHPSAMTDVGVELFHAAD 101

Query: 83  SLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAV 142
              + +A  L   AA  G K      A  L+  +  + D    + LLE A+E       V
Sbjct: 102 PAGWQEAARLFSAAAAKGGKSAVYNQALTLLEGKGAQKDTAAGLVLLERAAE----SGVV 157

Query: 143 DAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMF--LNGEEGFIEKN 200
           +A+  LG  Y +G  +  D  KA ++  R+ A         WA +M   L+ +   + KN
Sbjct: 158 NAEFNLGSRYMHGEDVPQDGQKAAFWLGRAHA-----QQHVWALVMLAVLHLDGTLMPKN 212

Query: 201 KQKALHWLNLSCMEGFDTGCEEFEKL 226
              AL  +     +G D G  E + L
Sbjct: 213 GALALKLV----QQGMDRGLPEAQFL 234



 Score = 48.1 bits (113), Expect = 5e-10
 Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 26  YLKAAEAGDRRAQYFLADSWFSSG----DLSKAEYWAQKAADSGDADACALLAQIKITN- 80
           + K+A  GD   ++ L   +        D  +A  W ++AA+ G+  A   L  +     
Sbjct: 436 FRKSAATGDATGKFNLGVPYERGEGVPRDYGEALRWYREAAEQGERRAMNNLGHLYEAGL 495

Query: 81  PVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDS 140
            V +D+ QA     +AA+ G    +  LA +    +    D  +A+     A+E      
Sbjct: 496 GVKVDHVQAVRWYRQAAERGLATAQNNLADMYARGRGVSKDDAEAVRWRRKAAEQ----G 551

Query: 141 AVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYS--EYWAGMMFLNGEEGFIE 198
             +AQ  LG  Y+ G G++ DD  A  +F+++   +  GY+  +   G  + NG+   +E
Sbjct: 552 HAEAQDELGHAYSEGKGVQQDDTMAVTWFRKA---AEQGYARGQNNLGRAYHNGQG--VE 606

Query: 199 KNKQKALHW 207
           ++  +A HW
Sbjct: 607 RDYAQAAHW 615



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 61/227 (26%), Positives = 87/227 (38%), Gaps = 40/227 (17%)

Query: 26  YLKAAEAGDRRAQYFLADSWFSSGDLSK----AEYWAQKAADSGDADACALLAQIKITNP 81
           Y +AAE G   AQ  LAD +     +SK    A  W +KAA+ G A+A   L        
Sbjct: 508 YRQAAERGLATAQNNLADMYARGRGVSKDDAEAVRWRRKAAEQGHAEAQDELGHAYSEGK 567

Query: 82  -VSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASE------ 134
            V  D   A     KAA+ G   G+  L     N Q  + DY +A      A E      
Sbjct: 568 GVQQDDTMAVTWFRKAAEQGYARGQNNLGRAYHNGQGVERDYAQAAHWYRKAVEQNHAVA 627

Query: 135 ----------------DLENDSA----------VDAQMLLGLIYANGVGIKADDDKATWY 168
                           D E  S           V A   LG +Y NG GI  ++ +A  +
Sbjct: 628 TGNLGTLYRYGTGVTKDPERASQLLRQAADGGHVSAMANLGTMYLNGEGIPRNEQEALRF 687

Query: 169 FKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEG 215
           F R +A   +   ++  G MF  G    + K++++A     L+  +G
Sbjct: 688 F-RLAADRGSAQGQWGLGYMFSMG--WGVAKDQKEAARLYRLAGAQG 731