Pairwise Alignments

Query, 292 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 301 a.a., chemotaxis protein from Escherichia coli ECRC98

 Score =  127 bits (320), Expect = 2e-34
 Identities = 86/286 (30%), Positives = 135/286 (47%), Gaps = 4/286 (1%)

Query: 11  RVLESVYPRFLVDLAQGDDA---RLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPL 67
           +VL  +  +F+VD A G D     +  A ++ F  RL + L      +       L   +
Sbjct: 16  QVLTCLPEKFVVDFANGIDVAQEHIRTAGERTFFRRLKEGLTGEGAARQNAINASLAQGV 75

Query: 68  SLRLTMVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARC 127
              L  + ++ + L   + A+T++   ++ L     R      +  +Q+  L +    + 
Sbjct: 76  EASLRWLTEMTTSLATTNYAITRVNDRVSSLVSDTARLAHYSADTREQLLTLADQVHHKL 135

Query: 128 RWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNTWSLPGRCFIVLEELRWGAFGDACRLG 187
              E+ L +   + +A    EQIF+ W AG Y ++S  GRC++ LEELRWGAFGD  R  
Sbjct: 136 NHLEEKLHRVDQVQRAQLHLEQIFSWWSAGRYASFSPAGRCYVALEELRWGAFGDVIRQS 195

Query: 188 SPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWF-ASSTVPTGGDHADFLSWLGKW 246
               V  LL  LR KA   +A+    + T R     W           +  D ++WLG W
Sbjct: 196 ETGQVNQLLDILRHKALTQMAQESGGSATVRLNTLDWLGGQGREQADNEWHDAINWLGDW 255

Query: 247 TTADKQPVCWSVTQRWQTVALGMPRLCSAQRLVGAMVEEIFSVNLA 292
            + ++ PV WS TQ  + + + MPRLCSA+RL  +MV+EIF    A
Sbjct: 256 CSEEQHPVIWSTTQAAEHLPVRMPRLCSAERLSESMVDEIFQKGAA 301