Pairwise Alignments

Query, 315 a.a., HTH-type transcriptional regulator TreR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 342 a.a., transcriptional repressor of Mal regulon from Escherichia coli BL21

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 11/254 (4%)

Query: 4   RLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQSDK 63
           ++TI D+A  +GV  STVS VL+ +  +S  T ERV A + + GF  +R A A+RG    
Sbjct: 6   KITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAAIEELGFVRNRQASALRGGQSG 65

Query: 64  VVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVV 123
           V+ +IV  L +         +  A   QG    ++      + +A+   +L  + +DGVV
Sbjct: 66  VIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLAQRFSLLLNQGVDGVV 125

Query: 124 LFGFTGITEEM--LAHWQSSLVLLARDAK---GFASVCYDDEGAIKILMQRLYDQGHRNI 178
           + G  G ++++  +A  +   V+ A  A       +V  D+  A ++L + L   GH+ I
Sbjct: 126 IAGAAGSSDDLRRMAEEKGIPVIFASRASYLDDVDTVRPDNMQAAQLLTEHLIRNGHQRI 185

Query: 179 SYLGVPHSDVTTGKR---RHEAYLAFCKAHKLNPVAALPGLAMKQGYENVAKVI--TPET 233
           ++LG   S +T  +R        L F      N V      + KQ  E +  ++   P  
Sbjct: 186 AWLGGQSSSLTRAERVGGYCATLLKFGLPFHSNWVLECTS-SQKQAAEAITALLRHNPTI 244

Query: 234 TALLCATDTLALGA 247
           +A++C  +T+A+GA
Sbjct: 245 SAVVCYNETIAMGA 258