Pairwise Alignments

Query, 460 a.a., DNA repair protein RadA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 455 a.a., DNA repair protein RadA from Pseudomonas simiae WCS417

 Score =  575 bits (1481), Expect = e-168
 Identities = 287/454 (63%), Positives = 358/454 (78%), Gaps = 4/454 (0%)

Query: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV 60
           MAKA KR + C ECGA +P+W GQC+ C AWNT+TE  + +    A   R +G+ G    
Sbjct: 1   MAKA-KRMYGCTECGATFPKWAGQCTECGAWNTLTETMIESGGAAAPTGR-AGWTGQQ-- 56

Query: 61  AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120
           A+++ L+++S+EE+PRFST   E DRVLGGG+V GS +LIGG+PG GKST+LLQTLC +A
Sbjct: 57  AQIKTLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIA 116

Query: 121 QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ 180
            +M  LYVTGEES QQVAMRA RLGLP D L +++ET IE I   A  E+PK+MVIDSIQ
Sbjct: 117 SRMPALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIESIIATARIEKPKVMVIDSIQ 176

Query: 181 VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240
            +    +QS+PG V+QVRE+AA L R+AK  G AI +VGHVTK+G+LAGP+VLEH +D  
Sbjct: 177 TIFTEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTV 236

Query: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV 300
           +  +G++D R R LR+ KNRFGAVNELGVFAMT++GL+EVSNPSAIFL+R  E   GS V
Sbjct: 237 LYFEGESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSVV 296

Query: 301 MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV 360
           M  WEGTRP+LVE+QALVD S +ANPRRV +GL+QNRLA+LLAVLHRHGG+   DQDVF+
Sbjct: 297 MATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFL 356

Query: 361 NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 420
           NVVGGVKV ET++DLAL+ A++SSLR+RPLP DL+VFGEVGL+GE+RPVPSGQER+ EAA
Sbjct: 357 NVVGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAA 416

Query: 421 KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDAL 454
           KHGF+RAIVP  N PK++P G+ I GV +L  AL
Sbjct: 417 KHGFKRAIVPKGNAPKESPPGITIIGVTRLEQAL 450