Pairwise Alignments

Query, 273 a.a., Ribosomal RNA small subunit methyltransferase A from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 260 a.a., dimethyladenosine transferase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  129 bits (324), Expect = 6e-35
 Identities = 84/258 (32%), Positives = 145/258 (56%), Gaps = 13/258 (5%)

Query: 11  ARKRFGQNFLNDQFVIDSIVSAINPQKG-QAMVEIGPGLAALTEPVGERLDQLTVIELDR 69
           A+K  GQ+FL D  + + I  ++    G + ++EIGPG+  LT+ + +   +L ++++D+
Sbjct: 6   AKKHLGQHFLKDLGIAEKIALSVTGHMGVKKVLEIGPGMGVLTDFLLQGDWELFLVDIDK 65

Query: 70  DLAARL-QTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS 128
           +  A L Q +P L     I   D + ++FG++ E  G  + V GN PYNIS+ + F +  
Sbjct: 66  ESIAYLHQKYPQLSEH--IIDADFLKYDFGKVIE--GDYI-VAGNFPYNISSQIFFKILE 120

Query: 129 YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVD 188
             + + ++  MLQKEV  R+ +   +K YG LSV+ Q + ++  +  VPP+ F PPPKV+
Sbjct: 121 VRNKVPEVVCMLQKEVAQRIASPHGNKEYGILSVLLQAFYDIEYLFTVPPTVFDPPPKVN 180

Query: 189 SAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAM- 247
           S V+RL  +A       + ++  R+  + F+ RRKT+RN+L ++   E +     DP + 
Sbjct: 181 SGVIRLKRNAVQTLECNE-KLFFRVVKQGFSTRRKTLRNALKSMGLSEEMKN---DPILD 236

Query: 248 -RAENISVAQYCQMANYL 264
            RAE + V  +  + N L
Sbjct: 237 KRAEQLDVPAFISLTNKL 254