Pairwise Alignments

Query, 783 a.a., DNA polymerase II from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 786 a.a., DNA polymerase II from Pseudomonas putida KT2440

 Score = 1066 bits (2756), Expect = 0.0
 Identities = 529/784 (67%), Positives = 621/784 (79%), Gaps = 4/784 (0%)

Query: 3   QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
           Q GF+LTRHW DTP+GT V FWLATD GP  + LA QESVAFIP  Q   A+ +L  E G
Sbjct: 4   QQGFVLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARVLLANETG 63

Query: 63  FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
            +L PL LKDF  +P+ GLY R HRQLM  E+RLR  G+ V+EAD+RPPERYLMERFIT+
Sbjct: 64  TKLKPLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERFITA 123

Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
           PV   G     G   +A+LKP P YRP L+ VS+DIET+  GELY I LEGCGQR VYML
Sbjct: 124 PVQFTGQPDAQGVYRDAQLKPQPGYRPALRLVSLDIETSERGELYSIALEGCGQRQVYML 183

Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
           GP NGDAS LDF+LEY A R  L+ +LN W A +DPD IIGWN+VQFDLR+L +HA+  +
Sbjct: 184 GPANGDASGLDFDLEYCADRAALITRLNQWMARHDPDAIIGWNLVQFDLRLLHEHAKSLQ 243

Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
           +PL LGR+ + +  R H    G  FA A GRL+IDGIEAL+SA W+F+SFSLE VAQ LL
Sbjct: 244 VPLALGRNGAVMTLRSHA-GGGHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQTLL 302

Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
           GEGK+ID P+ RMDEI+RRFAEDKPALA YNLKDCELVT+IF  T ++ FLLERA+V GL
Sbjct: 303 GEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVTGL 362

Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
            VDR GGSVAAF HLY P+MHR G+VAP+LG  P  ASPGG+VMDSRPGLYDSVLVLDYK
Sbjct: 363 AVDRSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVLDYK 422

Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
           SLYPSIIRTFLIDPVGL+EG+ QPD  HS EGF    FSR +HCLP IV  +W GR+ AK
Sbjct: 423 SLYPSIIRTFLIDPVGLIEGLRQPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGREAAK 482

Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
           R+GN PLSQALKIIMNAFYGVLG++ CRFFDPRLASSITMRGHQIMRQT++LIEA GYDV
Sbjct: 483 REGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDV 542

Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWW-AETLQKQRLTSALELEYETHFCR 600
           IYGDTDSTFVWLKGAH+EE+AA+IGR LV  VN WW A   +   L SALEL++E H+ R
Sbjct: 543 IYGDTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLHSALELQFEVHYRR 602

Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
           FLMPTIRG D GSKKRYAGL+Q  D  + MV+KGLE+VRTDW+PLA+QFQQELY R+FR+
Sbjct: 603 FLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRVFRS 662

Query: 660 EPYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
           EPY++YVR+ + + +AGE D  LVYRKRLRRPL++YQRNVPPHVRAARLAD+ N++  RP
Sbjct: 663 EPYRDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRLQRP 722

Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
           LQYQ  G I YV TT GPEPL+  ++P+DY+HY++RQL PVA+ ILPF+ D+FA L   Q
Sbjct: 723 LQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLTDHQ 782

Query: 780 LGLF 783
           L LF
Sbjct: 783 LLLF 786