Pairwise Alignments

Query, 783 a.a., DNA polymerase II from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 783 a.a., DNA polymerase II (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1467 bits (3798), Expect = 0.0
 Identities = 702/783 (89%), Positives = 740/783 (94%)

Query: 1   MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
           +AQAGFILTRHWRDTPQGTEVSFWLATDNGP+Q TLAPQESVAFIP  Q  RA  +LQ E
Sbjct: 1   VAQAGFILTRHWRDTPQGTEVSFWLATDNGPVQATLAPQESVAFIPTSQTSRAASLLQAE 60

Query: 61  QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
           + +RLTPL L+DFHRQPV GLYCR HRQLM  EK LRE GVTVYEADVRPPERYLMERFI
Sbjct: 61  KDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVTVYEADVRPPERYLMERFI 120

Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
           TSPVWV+G+M NG I NARLKPH DYRPPLKWVS+DIETTRHGELYCIGLEGCGQR VYM
Sbjct: 121 TSPVWVDGEMRNGVIRNARLKPHSDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRTVYM 180

Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
           LGP NGD   LDFEL YVASRPQLLEKLNAWFA +DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPANGDDHQLDFELVYVASRPQLLEKLNAWFAEHDPDVIIGWNVVQFDLRMLQKHAERY 240

Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
           R+PLRLGRDNSELEWREHGFKNGVFFAQA+GR+IIDGI+ALKSAFWNFSSFSLE V+QEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQEL 300

Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
           LGEGKSIDNPWDRMDEIDRRFA+DKPALATYNLKDCELVT+IFHKTEIMPFLLERAT+NG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMPFLLERATING 360

Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
           LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPP ASPGGYVMDS+PGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPLASPGGYVMDSQPGLYDSVLVLDY 420

Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
           KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIV+ IWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVSQIWHGRDEA 480

Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
           KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGH IMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYD 540

Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
           VIYGDTDSTFVWL+ AHSE +AA+IG  LV+HVN WWA+TLQ+Q LTSALELE+ETHFCR
Sbjct: 541 VIYGDTDSTFVWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQNLTSALELEFETHFCR 600

Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
           FLMPTIRGADTGSKKRYAGLIQEGD QRMVFKGLETVRTDWTPLAQ+FQQELYLR+FRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDSQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNE 660

Query: 661 PYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
           PYQ+YVR+TIDKLMAGELDA+LVYRKRLRRPL EYQRNVPPHVRAARLADE+N K+GRP 
Sbjct: 661 PYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNVPPHVRAARLADEQNLKQGRPA 720

Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
           QYQNRG IKYVWT NGPEP+DYQ+SPLDYEHYLTRQLQPVAEGILPF+EDNFATL+TGQL
Sbjct: 721 QYQNRGAIKYVWTVNGPEPVDYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQL 780

Query: 781 GLF 783
           GLF
Sbjct: 781 GLF 783