Pairwise Alignments

Query, 275 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 262 a.a., alkanesulfonate transporter permease subunit from Pseudomonas simiae WCS417

 Score =  159 bits (403), Expect = 5e-44
 Identities = 96/269 (35%), Positives = 137/269 (50%), Gaps = 17/269 (6%)

Query: 7   EKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPSQQVLAKLLTIA 66
           EKL  R   W  P+            +LL VW    +   +S   LP    V+      A
Sbjct: 4   EKLSHRVAPWVLPV------------LLLVVWQLSVSAGWLSTRILPAPSAVIE-----A 46

Query: 67  GPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVP 126
           G        +W HLA S  R  L  L    IG+ +G   GLS     +LD  +++ R VP
Sbjct: 47  GINLVASGEIWTHLAISGWRAGLGFLIGGSIGLALGFITGLSKWGERLLDSSVQMIRNVP 106

Query: 127 PLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQV 186
            LA +PL+++WFGI ET+KI L+ L    P+ ++   G+++     +  ++S G S   +
Sbjct: 107 HLALIPLVILWFGIDETAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMSRSYGLSGFSL 166

Query: 187 LWFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVLAGI 246
              VILPGALP IL G+R  LG  W TL+ AE I+A+ G+G++  +A EFL TDVV+  I
Sbjct: 167 FRQVILPGALPSILVGVRFALGFMWLTLIVAETISASAGIGYLAMNAREFLQTDVVVLAI 226

Query: 247 AVIAIIAFLLELGLRALQRRLTPWHGEVQ 275
            + AI+  L +L  R L+R    WH   Q
Sbjct: 227 VMYAILGKLADLAARGLERVWLRWHPAYQ 255