Pairwise Alignments

Query, 275 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 278 a.a., taurine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  325 bits (833), Expect = 7e-94
 Identities = 167/262 (63%), Positives = 203/262 (77%), Gaps = 8/262 (3%)

Query: 12  RRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPSQQVLAKLLTIAGPQGF 71
           R L  RW       +S+ TL  LL +WW V A  +I PLFLPP   VL K   +A   G+
Sbjct: 23  RSLSTRW-------ISLLTLVALLIIWWAVTATGVIEPLFLPPPSAVLQKGWLLA-TTGY 74

Query: 72  MDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYL 131
           MD+TLWQHL+ASL+RI L L  AV+  +PVGIA+G +   RGILDP+IE YRP+PPLAYL
Sbjct: 75  MDSTLWQHLSASLSRIGLGLGFAVLTAVPVGIAIGSNRIARGILDPLIEFYRPIPPLAYL 134

Query: 132 PLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVI 191
           PL+VIW GIGE SK+LLIYLAIFAP+A++   GV++    ++RAAQSLGA+RAQ++  VI
Sbjct: 135 PLIVIWCGIGELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAAQSLGATRAQLIRHVI 194

Query: 192 LPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVLAGIAVIAI 251
           LP ALP+ILTG+RIGLGVGWSTLVAAELIAAT GLGFMVQSA +FL TDVV+ GI VIA+
Sbjct: 195 LPSALPDILTGVRIGLGVGWSTLVAAELIAATSGLGFMVQSAAQFLVTDVVVLGILVIAL 254

Query: 252 IAFLLELGLRALQRRLTPWHGE 273
           IAF +E+GLRALQR+L PWHG+
Sbjct: 255 IAFAMEMGLRALQRKLVPWHGQ 276