Pairwise Alignments

Query, 275 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score =  156 bits (394), Expect = 5e-43
 Identities = 92/275 (33%), Positives = 139/275 (50%), Gaps = 17/275 (6%)

Query: 1   MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPSQQVLA 60
           MS   +  L  R   W  P+            +LL +W    +   +S   LP    V++
Sbjct: 1   MSRATSSNLTQRLAPWALPV------------LLLAIWQLAVSAGWLSTRILPAPSAVVS 48

Query: 61  KLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIE 120
                AG +      +W HLA S  R  L  +    IG+ +G   GLS     +LD  ++
Sbjct: 49  -----AGVELVRSGEIWTHLAISGWRAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQ 103

Query: 121 LYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLG 180
           + R VP LA +PL+++WFGI E++KI L+ L    P+ ++   G+++     +  A+S G
Sbjct: 104 MIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYG 163

Query: 181 ASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATD 240
            S   +   VILPGALP IL G+R  LG  W TL+ AE I+A  G+G++  +A EFL TD
Sbjct: 164 LSGFGLFRQVILPGALPSILVGVRFALGFMWLTLIVAETISANAGIGYLAMNAREFLQTD 223

Query: 241 VVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ 275
           VV+  I + A++  + +L  R L+R    WH   Q
Sbjct: 224 VVVLAIVLYAVLGKIADLAARGLERVWLRWHPAYQ 258