Pairwise Alignments

Query, 275 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 282 a.a., Urea carboxylase-related ABC transporter, permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  167 bits (424), Expect = 2e-46
 Identities = 92/256 (35%), Positives = 147/256 (57%), Gaps = 7/256 (2%)

Query: 17  RWPLSRQV--TLSIGTLAVLLTVWWTVAALQLISPLFLPPSQQVLAKLLTIAGPQGFMDA 74
           R P++R+    L++  L   L +W  +AA   + P+FLP   QVLAK  T     G +D 
Sbjct: 27  RAPIARRTYWVLALIGLFTPLVLWALLAAFGGLDPVFLPAPLQVLAKAWTWLTETGLLD- 85

Query: 75  TLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIELYRPVPPLAYLPLM 134
                +  S+ R+V   L + VI +P+G+ +G    V+ +L+P+ +  R +P +A++PL+
Sbjct: 86  ----DMGISVYRVVTGFLLSAVIALPLGLFIGSYRAVQALLEPLTDFIRYMPAVAFIPLV 141

Query: 135 VIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPG 194
           ++W GIGE SKI +I++  F  + +     V+     ++ AAQ++GA+R++++  VI P 
Sbjct: 142 MLWVGIGEGSKIAIIFIGTFFQMVLMVAEDVRRVPAAQVEAAQTMGANRSELIEKVIFPS 201

Query: 195 ALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAF 254
           A P +L  LRI +G  W+ LV AEL+AA  GLG+ +  A  FL TD + AGI VI +I  
Sbjct: 202 AKPALLDTLRITMGWAWTYLVVAELVAANSGLGYAILRAQRFLQTDTIFAGIIVIGLIGL 261

Query: 255 LLELGLRALQRRLTPW 270
           + +   R   RR  PW
Sbjct: 262 VTDQLFRLAHRRAFPW 277