Pairwise Alignments

Query, 315 a.a., Cytochrome bo(3) ubiquinol oxidase subunit 2 from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 313 a.a., ubiquinol oxidase subunit II from Pseudomonas simiae WCS417

 Score =  338 bits (867), Expect = 1e-97
 Identities = 167/304 (54%), Positives = 217/304 (71%), Gaps = 2/304 (0%)

Query: 1   MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60
           M   +Y + LG+L L    ++L GC   L+DPKGQIGL+QR+LI+TA  LML+VV+P I+
Sbjct: 1   MSKNRYPRLLGFLPLLGMMLMLGGCKWTLMDPKGQIGLDQRNLIITATLLMLLVVVPVII 60

Query: 61  MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120
           M   FAWKYRASN +A Y+P WSHS K+E  VW VPILIII L  +T+K+TH L+P +PL
Sbjct: 61  MTFAFAWKYRASNTNATYAPKWSHSTKIEIAVWLVPILIIIALGYITYKSTHELDPYRPL 120

Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180
             D KPI IEVV++DWKW FIYP+ GIATVNEI FP NTP+ F++TS++VMNSFFIP LG
Sbjct: 121 ESDVKPINIEVVALDWKWLFIYPDLGIATVNEIQFPENTPLNFRITSDAVMNSFFIPALG 180

Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAEFDQWVAKAKQ 240
            QIYAMAGMQTRLHLIANE    +GISA+YSG GF+GMKFKAI+T     F+ WVA+ K 
Sbjct: 181 GQIYAMAGMQTRLHLIANEKAEMEGISANYSGAGFTGMKFKAISTSQEG-FNAWVAEVKA 239

Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH 300
           +P  + D A ++ L  PS+ N V  +S  +P+LF  +++K+        +   + E +A 
Sbjct: 240 APKQL-DQAEYDALTKPSQNNPVALYSAYEPNLFQKIVDKYEGMKPGKPVKHEKKEVAAV 298

Query: 301 EGME 304
           EG +
Sbjct: 299 EGSD 302