Pairwise Alignments

Query, 315 a.a., Cytochrome bo(3) ubiquinol oxidase subunit 2 from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 313 a.a., cytochrome bo terminal oxidase subunit II from Pseudomonas putida KT2440

 Score =  354 bits (909), Expect = e-102
 Identities = 181/315 (57%), Positives = 231/315 (73%), Gaps = 11/315 (3%)

Query: 1   MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL 60
           M  ++Y +  G L  F G +LLSGCN  LLDPKGQ+G+EQ++LIL A GLML+VVIP I+
Sbjct: 1   MSKKRYPRLFGILP-FLGMLLLSGCNWTLLDPKGQVGIEQKNLILIATGLMLLVVIPVII 59

Query: 61  MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL 120
           M + FAWKYRASNK A Y+P+WSHS K+EA VW +PILIII L  +T+ +TH L+P +PL
Sbjct: 60  MTLAFAWKYRASNKAATYTPDWSHSTKIEAAVWIIPILIIIALGYVTYHSTHKLDPYRPL 119

Query: 121 AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG 180
             D KPI I+VV++DWKW FIYPEQGIATVN+I FPANTPV F+VTS++VMNSFFIP LG
Sbjct: 120 DSDVKPIQIDVVALDWKWLFIYPEQGIATVNKIVFPANTPVNFRVTSDAVMNSFFIPGLG 179

Query: 181 SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAEFDQWVAKAKQ 240
            QIYAMAGM T+LHLIANE G +DGISA+YSG GF+GMKFKA AT  + +FD+WVA+ KQ
Sbjct: 180 GQIYAMAGMTTKLHLIANENGEFDGISANYSGAGFTGMKFKATAT-SQEDFDKWVAEVKQ 238

Query: 241 SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKF--MAHGK------SMDMTQ 292
           SP  + D A ++ LA PSE N V  +S   P+ F  +++K+  M  G+      S D+  
Sbjct: 239 SPKKL-DKAEYDALAKPSENNPVALYSEASPEQFQLIVDKYEGMNRGRSHEEAGSKDLAT 297

Query: 293 PEGEHSAHEGMEGMD 307
            +G  S+ +   G +
Sbjct: 298 TKGVESSMQPAAGAE 312