Pairwise Alignments

Query, 623 a.a., Peptidyl-prolyl cis-trans isomerase D from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 624 a.a., peptidylprolyl isomerase from Pseudomonas simiae WCS417

 Score =  258 bits (660), Expect = 4e-73
 Identities = 184/634 (29%), Positives = 317/634 (50%), Gaps = 31/634 (4%)

Query: 1   MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY--AAKVNDQKISRGQFENA 58
           M+ ++R  +   + K I GII+     TG+       GN+    AKVN ++I++ +   A
Sbjct: 1   MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAIFQASGNSKQDVAKVNGEEITQTELSQA 60

Query: 59  FNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVK 118
            + +R ++ QQLG  +     +E   K LR+  L  LID  LL Q A + K G S+  + 
Sbjct: 61  VDMQRRQLMQQLGKDFDASLLDE---KLLREAALKGLIDRKLLLQGAADSKFGFSEAALD 117

Query: 119 QAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKG 178
           Q I  TP FQVDGKF   R++ ++ Q+G +  Q+ Q L  ++   Q+  G+AG+ F+   
Sbjct: 118 QVILQTPEFQVDGKFSAERFDQVIRQLGYSRMQFRQMLTQEMLIGQVRAGIAGSGFVTDS 177

Query: 179 ETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKL 238
           E    A L  Q R    AT+++ A  A   +T+ E+ +YY+Q+   FMTP+Q  + Y++L
Sbjct: 178 EVLAFARLEKQTRDF--ATVNIKANPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLEL 235

Query: 239 DAATM--QQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTK---TEDEAKAVLDE----L 289
             ++   Q  V D ++Q+ Y +      + +R  + +I+     T+ +AKA ++E    L
Sbjct: 236 KKSSFFDQVSVKDEELQAAYQKETANLAEQRRAAHILIEVNDKVTDAQAKAKIEEIQARL 295

Query: 290 NKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNA-GLKEKGQLSGVIKSSVGF 348
            KG  F ALAKE S D  SA  GGD+G+        + + A     K Q+S  ++S+ G+
Sbjct: 296 AKGEKFEALAKEFSQDPGSANTGGDLGFAGPGVYDPDFETALYALNKDQVSAPVRSTFGW 355

Query: 349 LIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQA 408
            +++L  ++  +V +   ++D +  ++K ++    +    +++ DAA   ++    A+ A
Sbjct: 356 HLIKLLGVEAPQVPTFASLKDKLTKELKTQQVEQRFVEATKQLEDAAFEASDL---AQPA 412

Query: 409 AGVKAT--QTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVL 466
           + +K T   +  F ++        + V  A F+  ++ E    G NS  I +D +   VL
Sbjct: 413 SDLKLTVHTSAPFGREGGEGVAANRAVVTAAFSPEVLDE----GANSTAIELDPETIIVL 468

Query: 467 RISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGA--EAMQAAGL 524
           R  EH   +  PL  V   ++  +   +A   AK  A++L+  L+ GK    + +     
Sbjct: 469 RAKEHLKPSQLPLESVSAAIRTQMAKERASAAAKAHADELIASLRDGKTPLNQPVDGQAW 528

Query: 525 KFGEPKTLSRSGRDP-ISQAAFALPLPA-KDKPSYGMATDMQGNVVLLALDEVKQGSMPE 582
           K  E  T S+   DP + QA F +P PA KDKP++   T   G++V++ L+ V + + P 
Sbjct: 529 KVTEAATRSQEAIDPAVLQALFRMPKPATKDKPTFTTVTLADGSLVIVRLNGVNEAAAPT 588

Query: 583 DQKKAMVQG-ITQNNAQIVFEALMSNLRKEAKIK 615
           D++KA  +  +     Q  F A    L  +A IK
Sbjct: 589 DEEKAQYRRFLASRVGQQDFAAYRKQLETKADIK 622