Pairwise Alignments

Query, 623 a.a., Peptidyl-prolyl cis-trans isomerase D from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 639 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  174 bits (440), Expect = 1e-47
 Identities = 160/647 (24%), Positives = 292/647 (45%), Gaps = 52/647 (8%)

Query: 1   MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQK-ISRGQFENAF 59
           M DS+R     L +  +  +II SF+L G+ GY     +     V D K I++ +++ A 
Sbjct: 1   MFDSIRNHKKYL-MGFLMILIIPSFVLFGIEGYTRFNESGAPVAVVDGKDITKAEWDQAH 59

Query: 60  NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119
             E  R+++ +    S L  +EG     R   L RL+ + LL   A +L L  SD ++ +
Sbjct: 60  QQESQRLREAMPSIDSSLLDSEG----ARYATLERLVRQRLLAAAATKLNLYTSDARLAR 115

Query: 120 AIFATPAFQV----DGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFM 175
            +    A       DG  D   Y  ++ + G+T + +   +R  L+ +Q+  G+ G+ F 
Sbjct: 116 DLQQNEAIATLRKPDGSLDVEAYRQLVARQGLTPEMFEARVRADLSQRQVSQGILGSGFA 175

Query: 176 LKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSY 235
                        ++R VR A       A++   T+ +I ++Y  N+ +F  PEQ  + Y
Sbjct: 176 PTALASVSLNAFFERREVRVARFAAGDFASQVQPTDADIEAFYSANQASFQAPEQAEIEY 235

Query: 236 IKLDAATMQQPVS--DADIQSYYDQHQDQF--TQPQRTRYSIIQTKT------EDEAKAV 285
           + LDAA +Q  VS   +D+++YYDQ+  +   T+ +R R+ ++          +D  +  
Sbjct: 236 LVLDAAALQNSVSFNPSDVKAYYDQNASRLSGTEERRARHILLTVPAGAPAADKDAVRKR 295

Query: 286 LDEL-----NKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLK-EKGQLS 339
            +EL      K   FA +AK +S D  SA  GGD+ +     +    ++A     KG +S
Sbjct: 296 AEELLAQVRAKPASFADVAKAESKDPGSASKGGDLDYFGRGAMVKPFEDAVFSLAKGAIS 355

Query: 340 GVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDT 399
            V+++  GF I++L DI+   V+S + +R +I A+++ + A   Y       S+      
Sbjct: 356 DVVETDFGFHIIQLTDIKAPPVRSFESMRPEIEAELRKQLAQKQYAEAADTFSNLVYEQA 415

Query: 400 ESL--AGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIIT 457
           +SL  A       ++       ++      L  + +  A+F+   + +      N++ I 
Sbjct: 416 DSLQPAADRLKLQIRKATVQRHAQPGATGVLTNERLLGALFDTESIDKKR----NTEAID 471

Query: 458 VDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAE 517
               +    R+ +H P   +PLA+V++QV+A +   +  + A+ + EK L   K+G  A+
Sbjct: 472 TGSGQLVSGRVVKHSPAHTQPLAEVRDQVRARLVAQRTAELARAEGEKQLQAWKSGGEAK 531

Query: 518 AMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDK--PSY-GMATDMQGNVVLLALDE 574
            +       G    +SR     ++Q      L A  K  P++ G+    QG  V+     
Sbjct: 532 GL-------GNAVVVSRENPQGLAQPVLTAALSADPKTLPAWVGVNLPDQGYAVVKV--- 581

Query: 575 VKQGSMPEDQK--KAMVQGITQNN---AQIVFEALMSNLRKEAKIKI 616
             +  +P D +   A+ Q + Q N   A    EA +  L++  K++I
Sbjct: 582 --EKVLPRDLRAAPALAQEVQQYNQWWASAENEAYVDALKERFKVRI 626