Pairwise Alignments

Query, 590 a.a., HTH-type transcriptional regulator SgrR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 566 a.a., Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  945 bits (2442), Expect = 0.0
 Identities = 447/565 (79%), Positives = 494/565 (87%)

Query: 25  MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSG 84
           MRLLNRLNQYQRLWQPSAG+ Q VTVSELAERCFCSERH+RTLLRQAQ+AGWL W+AQSG
Sbjct: 1   MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSG 60

Query: 85  RGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDT 144
           RGKRG+L+FLVTPESLR AMMEQALE G+Q +VLELAQLAPGELR +LQPFMGGQWQNDT
Sbjct: 61  RGKRGRLQFLVTPESLRTAMMEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDT 120

Query: 145 PTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDGL 204
           PTLRIPYYRPL+PLQPGFLPGRAEQHLAGQ+FSGLTRFD ++Q P GDLAHHWE S DGL
Sbjct: 121 PTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDRDSQYPCGDLAHHWEVSADGL 180

Query: 205 RWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHR 264
           RWDFY+RSTLHWHNGDAV  + LH+RL  LL LPAL +LFISV RIEVTHPQCLTF LHR
Sbjct: 181 RWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR 240

Query: 265 PDYWLAHRLASYCSHLVHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYW 324
           PDYWLAHRLASYCS L HP  PLIGTGPFRL  FT ELVRLESHD+YHL HPLLKA+E+W
Sbjct: 241 PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFW 300

Query: 325 ITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARK 384
           ITP LF +DLGTSCRHPVQI IGKPEEL  +SQVSSGISLGFCYLTL+K  RL++ QAR+
Sbjct: 301 ITPQLFAQDLGTSCRHPVQIAIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARR 360

Query: 385 VISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLPIELHT 444
           +I IIH + LL+TL V ENLI  S  LLPGWTIP WQ  DE  LPK LTL YHLP+ELHT
Sbjct: 361 LIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVDETPLPKKLTLAYHLPVELHT 420

Query: 445 MAERLQATLSAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP 504
           MAE+L+  L+  GCELT+IFHNAKNWD+   LA ADLMMGDRLIGEAPEYTLEQWLRCD 
Sbjct: 421 MAEQLRHYLATLGCELTLIFHNAKNWDNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ 480

Query: 505 LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMADATLTPLFNYHYRISAP 564
           +W HV DAPA++HLQ+TLDA+Q+ P+E++R  AL+ VF+ LM DATLTPLFNYHYRISAP
Sbjct: 481 IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAP 540

Query: 565 PGVNGVRLTPRGWFEFTEAWLPAPS 589
           PGVNGVRLTPRGWFEF+EAWLP PS
Sbjct: 541 PGVNGVRLTPRGWFEFSEAWLPPPS 565