Pairwise Alignments

Query, 590 a.a., putative multidrug resistance ABC transporter ATP-binding/permease protein YheI from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 688 a.a., Lipid A export ATP-binding/permease protein MsbA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  316 bits (809), Expect = 2e-90
 Identities = 203/590 (34%), Positives = 325/590 (55%), Gaps = 15/590 (2%)

Query: 9   WYFRREWRRYLGAVALLVIIAMLQ-LVPPKVVGIVVDGV-----TEQHFTTGQILMWIAT 62
           W F R +R  L +  LL + +    LVPP +   ++D V       Q   TG +L  +  
Sbjct: 100 WRFARPYRWTLLSGFLLTLASTAATLVPPYLTIPLMDRVLIPFQNGQAIDTGLVLALLGG 159

Query: 63  MVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARATN 122
           ++  A++ + L +    LL   S +++ +LR   +  L     +++   RTGDLMAR  +
Sbjct: 160 LLGSALLAWSLGWARTWLLALVSERISSDLRTTTFDHLLELSLDYFSSKRTGDLMARIGS 219

Query: 123 DVDRV-VFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFALLPMPVMAIMIKRNGDA 181
           + DR+ VF +   +  L D L++G   +I+ S  I+  L L  L+P+P +  MI    D 
Sbjct: 220 ETDRISVFLSLHALDFLTDVLMIGMTAVILFS--INPWLALATLVPLPFIGWMIHLVRDR 277

Query: 182 LHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARID 241
           L   F+     +  + +   +++  IR++KAF  E R++  F    E     N R+ +  
Sbjct: 278 LRTGFEKIDRVWGEVTNVLADTIPGIRVVKAFAQEAREARRFRRANEHNLAVNDRINKTW 337

Query: 242 ARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNIV 301
           + F PT+ +   +  L+    G W+V Q  +T+G LT+F+ Y+G     + +++ + ++ 
Sbjct: 338 SLFTPTVTLLTEIGLLVVWAFGIWLVSQSEITVGVLTAFIAYIGRFYGRLDSMSRIVSVT 397

Query: 302 ERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALKP 361
           ++ ++   RI  +L     V + ++PVP  R +  + +   ++       + N++  ++P
Sbjct: 398 QKAASGAKRIFDILDHVSNVPEPTQPVPLTRVQGGLQMENVSFRYGSRTVIRNLSLDIRP 457

Query: 362 GQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 421
           G+M+G+ G +GSGKSTL++L+ R +DVSEG IR     + ++ +  +R  + +V Q PFL
Sbjct: 458 GEMIGLVGHSGSGKSTLVNLLCRFYDVSEGGIRIDGTDIRRVGVADFRRHIGLVLQEPFL 517

Query: 422 FSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRI 481
           F  T+A NIA G P AT+ EI   AR A  H+ ILRLPQGYD+ VGERG  LSGG++QRI
Sbjct: 518 FFGTIAENIAYGRPGATRTEIVAAARAAHAHEFILRLPQGYDSLVGERGQGLSGGERQRI 577

Query: 482 SIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEII 541
           SIARALL++  ILILD+A S+VD  TE +I   L    QGRT I  AHRLS L +A  ++
Sbjct: 578 SIARALLIDPRILILDEATSSVDTETEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLV 637

Query: 542 VMQHGHIAQRGNHDVLAQQSGWYRDMY-----RYQQLEAALD-DAPENRE 585
           VM  G + + G HD L  Q G Y  +Y     + Q+  A LD D PE+++
Sbjct: 638 VMDRGQVVEIGPHDELMAQRGAYWRLYEAQARKEQEAAALLDADTPEDKD 687