Pairwise Alignments

Query, 590 a.a., putative multidrug resistance ABC transporter ATP-binding/permease protein YheI from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  256 bits (653), Expect = 2e-72
 Identities = 173/575 (30%), Positives = 296/575 (51%), Gaps = 22/575 (3%)

Query: 11  FRREWRRY--------LGAVALLVIIA----MLQLVPPKVVGIVVDGVTEQHFTTGQILM 58
           FRR W           +  +AL++  A    ML L+ P    ++ DG  +   T   +L+
Sbjct: 13  FRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKP----LLDDGFGK---TDRSVLL 65

Query: 59  WIATMVL-IAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLM 117
           W+  +V+ + ++  +  Y+    +   S ++ + +R   +  +      F+ +  TG L+
Sbjct: 66  WMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLL 125

Query: 118 ARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFALLPMPVMAIMIKR 177
           +R T D ++V  ++   ++T+V        + IMM    SWQL++  ++  P+++I I+ 
Sbjct: 126 SRITYDSEQVASSSSGALITVVREGASIIGLFIMMF-YYSWQLSIILVVLAPIVSIAIRV 184

Query: 178 NGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRV 237
                    K  Q     +    ++ L   + +  FG ++ ++  F   +     + M++
Sbjct: 185 VSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKM 244

Query: 238 ARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWM 297
               +  DP I +   +A    +   S+  V  SLT G +T     +  ++ P+ +L  +
Sbjct: 245 VSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNV 304

Query: 298 FNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNF 357
               +RG AA   + A+L      ++G   +    G+L+     FTYP  + PAL N+N 
Sbjct: 305 NAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTFTYPGREVPALRNINL 364

Query: 358 ALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQ 417
            +  G+ + + G +GSGKST+ SLI R +D+ EG I      L +  L S R+++A+VSQ
Sbjct: 365 KIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQ 424

Query: 418 TPFLFSDTVANNIALG-CPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGG 476
              LF+DTVANNIA       ++++IE  AR+A   D I ++  G DT +GE GV+LSGG
Sbjct: 425 NVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGG 484

Query: 477 QKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTE 536
           Q+QRI+IARALL ++ ILILD+A SA+D  +E  I   L +  + RT ++ AHRLS + +
Sbjct: 485 QRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQ 544

Query: 537 ASEIIVMQHGHIAQRGNHDVLAQQSGWYRDMYRYQ 571
           A EI+V++ G I +RG H  L  Q G Y  +++ Q
Sbjct: 545 ADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579