Pairwise Alignments

Query, 673 a.a., UvrABC system protein B from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 678 a.a., excinuclease ABC, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  712 bits (1838), Expect = 0.0
 Identities = 368/664 (55%), Positives = 491/664 (73%), Gaps = 10/664 (1%)

Query: 5   FKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLA 64
           FK+ S + P+GDQP AI+ L EG+  G   Q LLGVTGSGKTFT+ANVI ++QRPT+VL 
Sbjct: 3   FKIISDYSPTGDQPNAIKNLSEGISSGEPSQVLLGVTGSGKTFTVANVIQEVQRPTLVLC 62

Query: 65  PNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124
            NKTLAAQLYGE K+FFP+NAVEYF+SYYDYYQPEA++P+S  +IEKD S+NE IE++RL
Sbjct: 63  HNKTLAAQLYGEFKQFFPDNAVEYFISYYDYYQPEAFIPTSGVYIEKDLSINEEIEKLRL 122

Query: 125 SATKAMLE-RRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYAR 183
           SAT A+L  RRDV+VVASVS IYG+G+P+ + K +++L  G  I +  +L +L ++ Y+R
Sbjct: 123 SATSALLSGRRDVIVVASVSCIYGIGNPEEFGKNVVNLEEGQRIPRNQLLFQLVDILYSR 182

Query: 184 NDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTI 243
            +  F+ GTFRV+G+ +DIF A +D  A R+  + +E+E +   DP TG+ +S+  + TI
Sbjct: 183 ANVEFKHGTFRVKGDTVDIFVAYAD-FAYRIYFWGDEIEGIQRIDPETGKRISSEKQITI 241

Query: 244 YPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYC 303
           +P   +VT +E I  A++EI+++L ++     ++ +L E  RL +RT+FDLEM+ ELGYC
Sbjct: 242 FPANLFVTGKETIDVAIKEIQDDLMSQISFFEKDMRLEEASRLRERTEFDLEMIRELGYC 301

Query: 304 SGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVE 363
           SG+ENYSR+   R  G  P  L DY P D +LV+DESHVT+PQI  M+ GDR+RK  LVE
Sbjct: 302 SGVENYSRYFDRRSAGARPFCLLDYFPDDYMLVIDESHVTVPQIRAMWGGDRSRKVNLVE 361

Query: 364 YGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPII 423
           YGFRLPSALDNRPLKF+EFE+L  Q IYVSATP +YEL ++ G VV+Q++RPTGLLDP+I
Sbjct: 362 YGFRLPSALDNRPLKFDEFESLTNQVIYVSATPADYELNQTDGVVVEQIIRPTGLLDPLI 421

Query: 424 EVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTV 483
           EVRP   Q+DDLL EI Q     +RVLVTTLTKRMAE+L ++LE  G + RY+HS++ ++
Sbjct: 422 EVRPSGDQIDDLLEEIDQTIKKGDRVLVTTLTKRMAEELNKFLERAGIKSRYIHSEVKSL 481

Query: 484 ERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 543
           +R+EI+R+LRLG FDVLVG+NLLREGLD+PEVSLVAILDADKEGFLR+ERSL+QTIGRAA
Sbjct: 482 DRVEILRELRLGIFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRNERSLVQTIGRAA 541

Query: 544 RNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQ-N 602
           RN NG+ I+Y D++T SM +AI ET+RRR  Q  YNEEHGITP+ + K    I  +GQ  
Sbjct: 542 RNENGRVIMYADRVTASMQRAIDETKRRRSIQMAYNEEHGITPKTVIKSKDKI--MGQTK 599

Query: 603 IAKTKAKGRGKSRPIVE-----PDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQ 657
           +A +K   +       E      D V   +S + L++ I + +  M + A+ L F EAA+
Sbjct: 600 VADSKKNAKFYDDHFTEENAYAADPVVQYLSKEKLEKLIPQTQKQMEKAAKELNFMEAAR 659

Query: 658 IRDQ 661
           +RD+
Sbjct: 660 LRDE 663