Pairwise Alignments

Query, 583 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 441 a.a., Phage tail fiber protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 87/295 (29%), Positives = 116/295 (39%), Gaps = 49/295 (16%)

Query: 167 DASLTAKGFTQLSSATNSESEILAATPKAVKAAYDLAAGKASASHTHPWNQITDVPAASL 226
           DASLT KG  QLSSAT+S+SE LA+TPKAVK        KA              P  S 
Sbjct: 6   DASLTKKGIVQLSSATDSDSEALASTPKAVKTVMGEVQTKA--------------PLDSP 51

Query: 227 TVKGTVQLSSATNSTSETQAATPKAVKAAYDLAAGKAPVSHTHPWSQITDVPAASLTVKG 286
            + GT      T  T ET AA  +   AA+ +AA  A +        +   P A  T+K 
Sbjct: 52  ALTGT-----PTAPTPETTAAGIEIATAAF-VAAKVAQL--------VGSAPEALDTLK- 96

Query: 287 TVQLSSATNSTSETQAATPKAVKAVYDLANGKQPADATLTALAGLATAADKLPYFTG--N 344
             +L+ A  +        P     V +   GKQP D TLTAL+G   + D L  + G  N
Sbjct: 97  --ELADALGN-------DPNFATTVLNKLAGKQPLDDTLTALSG--KSVDGLIEYIGLRN 145

Query: 345 DTASLTTLTNVG------RNILDKASTQAVIQYLGLSDASGYVGRWLNTQVFTSSGTYTP 398
                      G        ++ + +  A+      SD+   +G   N    T  G    
Sbjct: 146 TIDKAAGALPAGGTAVAANRLVSRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILR 205

Query: 399 TPGTKRIRVTITGGGGGGGGCKA-ISNNETFFGAGGGAGGTVITTLILTKDSYPV 452
             GT    + I   G  G    A I ++     A       + TTL    DS+PV
Sbjct: 206 LTGTGDGEILIGWSGANGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPV 260



 Score = 57.8 bits (138), Expect = 9e-13
 Identities = 67/226 (29%), Positives = 98/226 (43%), Gaps = 15/226 (6%)

Query: 280 ASLTVKGTVQLSSATNSTSETQAATPKAVKAVYDLANGKQPADATLTALAGLATAADKLP 339
           ASLT KG VQLSSAT+S SE  A+TPKAVK V      K P D+   AL G  TA     
Sbjct: 7   ASLTKKGIVQLSSATDSDSEALASTPKAVKTVMGEVQTKAPLDS--PALTGTPTAPTPET 64

Query: 340 YFTGNDTASLTTLTNVGRNILDKASTQAVIQYLGLSDASGYVGRWLNTQVFTSSGTYTPT 399
              G + A+   +      ++  A  +A+     L+DA G    +  T +   +G   P 
Sbjct: 65  TAAGIEIATAAFVAAKVAQLVGSA-PEALDTLKELADALGNDPNFATTVLNKLAGK-QPL 122

Query: 400 PGTKRIRVTITGGGGGGGGCKAISNNETFFGAGGG--AGGT-VITTLILTKDSYPVTIG- 455
             T    +T   G    G  + I    T   A G   AGGT V    ++++ + P   G 
Sbjct: 123 DDT----LTALSGKSVDGLIEYIGLRNTIDKAAGALPAGGTAVAANRLVSRGALPALTGT 178

Query: 456 --AGGAGGVSATNGLKGGDSSFGSVIAPGGEGGGKSGVTNTNGGNG 499
                +G +       G  + +G+++   G G G+  +   +G NG
Sbjct: 179 TRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEI-LIGWSGANG 223