Pairwise Alignments

Query, 583 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 401 a.a., Tail fiber protein from Escherichia coli BL21

 Score = 68.9 bits (167), Expect = 4e-16
 Identities = 73/231 (31%), Positives = 97/231 (41%), Gaps = 16/231 (6%)

Query: 97  SGALIAVGNCPESYKPQLAEGSGRTQ--TVRMVLITSSTDNITLKIDPAVVLATRKYVDD 154
           SGA  A     E+ K   A  S +    T      TS T+    +   A   +T      
Sbjct: 171 SGAEAASAKATEAEKSAAAAESSKNAAATSAGAAKTSETNAAASQQSAATSASTAA---T 227

Query: 155 KISEHEQSRRHPDASLTAKGFTQLSSATNSESEILAATPKAVKAAYDLAAGKASASHTHP 214
           K SE   S R   AS  A      SS TN+ S    A   A  A     A K S ++   
Sbjct: 228 KASEAATSARDAVASKEAAK----SSETNASSSAGRAASSATAAENSARAAKTSETNARS 283

Query: 215 WNQITDVPAASLTVKGTVQLSSATNSTSETQAATPKAVKAAYDLAAGKAP-VSHTHPWSQ 273
                +  A++     T    SA+ ++++   A   AV A+   +A +A  +   +   +
Sbjct: 284 SETAAERSASAAADAKTAAAGSASTASTKATEAAGSAVSASQSKSAAEAAAIRAENSAKR 343

Query: 274 ITDVPAA------SLTVKGTVQLSSATNSTSETQAATPKAVKAVYDLANGK 318
             D+ +A        T KG VQLSSATNSTSET AATPKAVK V D  N K
Sbjct: 344 AEDIASAVALEDADTTRKGIVQLSSATNSTSETLAATPKAVKVVMDETNRK 394



 Score = 57.8 bits (138), Expect = 8e-13
 Identities = 42/99 (42%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 167 DASLTAKGFTQLSSATNSESEILAATPKAVKAAYDLAAGKA--SASHTHPWNQITDVPAA 224
           DA   A G    +S   +E+   A +    K+A + AA +A  SA           +  A
Sbjct: 297 DAKTAAAGSASTASTKATEAAGSAVSASQSKSAAEAAAIRAENSAKRAEDIASAVALEDA 356

Query: 225 SLTVKGTVQLSSATNSTSETQAATPKAVKAAYDLAAGKA 263
             T KG VQLSSATNSTSET AATPKAVK   D    KA
Sbjct: 357 DTTRKGIVQLSSATNSTSETLAATPKAVKVVMDETNRKA 395



 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 28/47 (59%), Positives = 29/47 (61%)

Query: 167 DASLTAKGFTQLSSATNSESEILAATPKAVKAAYDLAAGKASASHTH 213
           DA  T KG  QLSSATNS SE LAATPKAVK   D    KA  +  H
Sbjct: 355 DADTTRKGIVQLSSATNSTSETLAATPKAVKVVMDETNRKAHWTVRH 401



 Score = 34.3 bits (77), Expect = 1e-05
 Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 22/173 (12%)

Query: 172 AKGFTQLSSATNSESEILAATPKAVKAAYDLAAGKASASHTHPWNQITDVPAASLTVKGT 231
           A    + +SA  +E+E  AA  ++ K A   +AG A  S T+         AAS      
Sbjct: 169 ASSGAEAASAKATEAEKSAAAAESSKNAAATSAGAAKTSETN--------AAAS------ 214

Query: 232 VQLSSATNSTSETQAATPKAVKAAYDLAAGKAPVSHTHPWSQITDVPAASLTVKGTVQLS 291
            Q S+AT++++    A+  A  A   +A+ +A  S     S      A+S T     + S
Sbjct: 215 -QQSAATSASTAATKASEAATSARDAVASKEAAKSSETNASSSAGRAASSAT---AAENS 270

Query: 292 SATNSTSETQAATPKAVKAVYDLANGKQPADATLTALAGLATAADKLPYFTGN 344
           +    TSET A + +         +    ADA   A    +TA+ K     G+
Sbjct: 271 ARAAKTSETNARSSETAAE----RSASAAADAKTAAAGSASTASTKATEAAGS 319