Pairwise Alignments

Query, 583 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 540 a.a., hypothetical protein from Escherichia coli BL21

 Score =  329 bits (843), Expect = 2e-94
 Identities = 218/415 (52%), Positives = 239/415 (57%), Gaps = 58/415 (13%)

Query: 1   MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGTLPTPDAKQTALVNEKRRAAL 60
           MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGG LPTPDAKQTALVNEKRRAAL
Sbjct: 1   MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPDAKQTALVNEKRRAAL 60

Query: 61  NMLYIDPQNSSQIIAEQVIPENEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGR 120
           NMLYIDPQNSSQIIAEQVIPENEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGR
Sbjct: 61  NMLYIDPQNSSQIIAEQVIPENEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGR 120

Query: 121 TQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKISE-----HEQSRRH---PDASLTA 172
           TQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDK+ E      ++  +H   PD     
Sbjct: 121 TQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKVLELKVFVDDKMAKHLAAPDPH--- 177

Query: 173 KGFTQLSSATNSESEILAATPKAVKAAYDLAAGKASASHTHPWNQITDVPAASLTVKGTV 232
                 S     ES  L  TPKA   A                N  T +   +      +
Sbjct: 178 ------SQYAPKESPTLTGTPKAPTPA--------------EGNNTTQIATTAFVQAALM 217

Query: 233 QLSSATNSTSETQAATPKAVKAAYDLAAGKAPVSHTHPWSQITDVPAASLTVKGTVQLSS 292
            L +   +T +T     K + AA +        S T   +     P  S    GT    +
Sbjct: 218 ALINGAPATLDTM----KEIAAAIN---NDPKFSTTINNALALKAPLLSPAFTGTPTAPT 270

Query: 293 ATNSTSETQAATPKAVKAVYDLANGKQPADATLTALAGLATAADKLPYFTGNDTASLTTL 352
           A  S + TQ AT   VK+      G  P  A L  L  LA A        GND    TT+
Sbjct: 271 AAQSVNNTQIATTAFVKSAIAAMVGSAP--AALDTLNELAAA-------LGNDPNFATTM 321

Query: 353 TN--VGRNILDKASTQ-------AVIQYLGLSDASGYVGRWLNTQVFTSSGTYTP 398
            N   G+  LD   T         ++ YLGL DA   +G       F SS    P
Sbjct: 322 LNALAGKQPLDNTLTNLSGKDVAGLLAYLGLGDA--LIGDECKIAGFDSSNVNAP 374