Pairwise Alignments

Query, 366 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 347 a.a., Pyocin R2_PP, tail formation from Pseudomonas putida KT2440

 Score =  182 bits (463), Expect = 9e-51
 Identities = 114/341 (33%), Positives = 184/341 (53%), Gaps = 23/341 (6%)

Query: 15  PAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDADGKIVLPRRGAVVTLAL 74
           P + I  +G DIT ++++RL+ L  +D  G E+D+ +L +DD D  + LP RG+ V + +
Sbjct: 3   PTYQIVADGSDITALINDRLLLLRTSDKPGMESDEFELRIDDRDQAVALPARGSNVVVMM 62

Query: 75  GWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREKSWHKTTVGEVVKEI 134
           G++GQ L   GA+TVDE+E +G PD + IR +++D R +  T R  SW    + ++V EI
Sbjct: 63  GYEGQGLTRLGAYTVDEVELSGPPDTIVIRGKASDMRGSGKTVRSGSWENVPLSQIVGEI 122

Query: 135 ASRHKLKMALGKDLSDKLVEHIDQTNESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGK 194
           A R+  +++   D     VE +DQ NESD +F+ RLA+QY   A V    LL + +  G+
Sbjct: 123 AKRNGWEVSCPVDTK---VERVDQRNESDYNFVTRLAKQYDCTAKVAESKLLVMPRQGGQ 179

Query: 195 SATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQ 254
           S TGK L V+TI +     ++F L DR           ++++  K +    K  +    +
Sbjct: 180 STTGKALAVVTINKTYVSRYQFRLGDR-----------NSQKAVKTQHQDPKTGKLQVVE 228

Query: 255 KKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRAD 314
               E+  G   V TD +V      Y N+++A++AAK +     R  A   L++  GR D
Sbjct: 229 LANDESPDGLPPVHTDRHV------YPNKTSAQQAAKARLAAFNRSTAGVRLEM-PGRTD 281

Query: 315 LYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLE 355
           L+ E  +   GFK P  D E+ +  +   V   +G+TT++E
Sbjct: 282 LFAERSINAQGFK-PGLDGEYLVDGV-EQVFTQSGWTTTVE 320