Pairwise Alignments

Query, 366 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 347 a.a., Gene D protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 80/354 (22%), Positives = 152/354 (42%), Gaps = 40/354 (11%)

Query: 14  TPAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDADGKIV---LPRRGAVV 70
           TP F++    ++IT  +   +  ++ +D+   E+D + + L+D+ G+ V    P +G  +
Sbjct: 15  TPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTL 74

Query: 71  TLALGWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREKSWHKTTVGEV 130
            L LG++G+ L   G + +D+I+ +  P  + I   +    + L T+  + + +TT+  +
Sbjct: 75  ALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAI 134

Query: 131 VKEIASRHKLKMALGKDLSDKLVEHIDQTNESDGSFLMRLARQYGAIASVKNGNLLFIRQ 190
              IA +H L +A GK ++   ++ + Q  E+D +FL RLA +YG    V    L+F   
Sbjct: 135 ASRIAQKHGLTLA-GK-IAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHL 192

Query: 191 GQGKSATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKKESTTVKRKRR 250
              +       PV T+ R D   + F       Y                ++ TV+ +  
Sbjct: 193 PTLRCLA----PVKTLRRTDVSHYTFKDTINRIY----------------KNATVQHQNS 232

Query: 251 TKKQ----KKEPEAKQGDYLVGTDENVLVLNR----TYANRSNAERAAKMQWERLQRGVA 302
            +K+      + + K       T  + L +N     T A ++ A  A     E  Q G  
Sbjct: 233 KQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTL 292

Query: 303 SFSLQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLEL 356
           S       G   L     +++S F   +   +W I    H ++   G+TT +++
Sbjct: 293 SLM-----GCPQLTAGNKIELSDF--GVLSGQWLIDKSMHKLTRSGGYTTEIDI 339