Pairwise Alignments

Query, 430 a.a., Serine--tRNA ligase from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 439 a.a., Seryl-tRNA synthetase (EC 6.1.1.11) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  503 bits (1294), Expect = e-147
 Identities = 264/436 (60%), Positives = 316/436 (72%), Gaps = 11/436 (2%)

Query: 1   MLDPNLLRNEPDAVAEKLARRGFK---LDVDKLGALEERRKVLQVKTENLQAERNSRSKS 57
           MLD   LR + D V  +L  R      LDV    ALE  RK LQ  TE+LQ+ RN+ SK 
Sbjct: 1   MLDIVQLRKDLDGVVARLQTRKQPQPYLDVPAYQALESERKALQTHTEDLQSRRNALSKQ 60

Query: 58  IGQAKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGK 115
           IG  K +G   + E    +V  L  ELDA+ A LD +QAE++++   +PNLP + VPVG 
Sbjct: 61  IGMLKGKGLHAEAEAAMAQVTALKAELDASTARLDVIQAELQNLLRAVPNLPHESVPVGD 120

Query: 116 DENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRA 175
           DEN NVE+ RWGTPR FDFE+RDHV +GE   GLDF    KL GSRF  M+G IAR+HRA
Sbjct: 121 DENGNVELRRWGTPRTFDFELRDHVDIGEK-LGLDFETGTKLAGSRFTFMRGPIARLHRA 179

Query: 176 LSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPL----EEEADTSN 231
           L+QFMLD+ T++HGY+E Y PY+VN +TL GTGQLPKF GD+F  +      EE  DT  
Sbjct: 180 LAQFMLDVQTQEHGYTECYTPYIVNAETLLGTGQLPKFEGDMFAVKKGGQEGEEVPDTQA 239

Query: 232 YALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVE 291
             LI T+E+ LTN VR  ++ E +LPI++TAHTPCFRSEAGS GRDTRG+IR HQFDKVE
Sbjct: 240 LYLISTSEITLTNTVRDTVLVEAELPIRLTAHTPCFRSEAGSAGRDTRGMIRQHQFDKVE 299

Query: 292 MVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQN 351
           MVQIV PE S  AL+ MTGHAE VLQ LGLPYR I+LCTGDMGFG+ +T+DLEVW+PAQ 
Sbjct: 300 MVQIVHPEKSYEALDAMTGHAEAVLQKLGLPYRVIVLCTGDMGFGSTRTHDLEVWVPAQG 359

Query: 352 TYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADG 411
           TYREISS SN   FQARR+QAR ++ +  K  LVHTLNGSGLAVGRTLVAV+EN+Q ADG
Sbjct: 360 TYREISSVSNCEAFQARRLQARFKN-AQGKNELVHTLNGSGLAVGRTLVAVLENFQNADG 418

Query: 412 RIEVPEVLRPYMNGLE 427
            + VPEVLRPY+ GLE
Sbjct: 419 SVTVPEVLRPYLGGLE 434