Pairwise Alignments

Query, 213 a.a., Penicillin-binding protein activator LpoB from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 212 a.a., Lipoprotein YcfM, part of a salvage pathway of unknown substrate from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  376 bits (966), Expect = e-109
 Identities = 190/213 (89%), Positives = 197/213 (92%), Gaps = 1/213 (0%)

Query: 1   MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPG 60
           MTKM RYA I ALA+FL+GC+ QR+PAPVEEVKPAPEQPA+P QP P VPSVPTIPQQPG
Sbjct: 1   MTKMHRYAAIAALAIFLSGCMAQRQPAPVEEVKPAPEQPAQPPQP-PVVPSVPTIPQQPG 59

Query: 61  PIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAE 120
           PIEHEDQT  PAP +RHYDWNGAMQP+VSKML ADGVTAGSVLLVDSVNNRTNGSLNA E
Sbjct: 60  PIEHEDQTGQPAPKVRHYDWNGAMQPLVSKMLQADGVTAGSVLLVDSVNNRTNGSLNANE 119

Query: 121 ATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSS 180
           ATETLRNALANNGKFTLVS QQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGA YVLYSS
Sbjct: 120 ATETLRNALANNGKFTLVSVQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAQYVLYSS 179

Query: 181 ASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ 213
           ASGNVNAP LQMQLMLVQTGEIIWSGKGAV QQ
Sbjct: 180 ASGNVNAPALQMQLMLVQTGEIIWSGKGAVQQQ 212