Pairwise Alignments

Query, 661 a.a., Cyclic di-GMP phosphodiesterase PdeR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 957 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  322 bits (824), Expect = 7e-92
 Identities = 196/557 (35%), Positives = 319/557 (57%), Gaps = 16/557 (2%)

Query: 104 RDLSHGLSFAEQ------VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157
           RD++ G +  EQ      V   A   IVILD    +   N+     TG +  D+IG++V 
Sbjct: 390 RDITAGKALEEQQRLASTVFEAASEGIVILDPDYKLIAVNQAFSRVTGFETDDMIGRNVV 449

Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTRKGQRLF--LFRNKFVHSGSGKNEIF 215
           +L  S R+A       R    S   ++ EL + TRK   L+    +   V    GK    
Sbjct: 450 EL-PSSRDARRHFPVIRQALLSHGTWQGEL-VETRKNGELYPQWLQLNVVRDVRGKVS-H 506

Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQELIDHAINHA--DNNKVGVVYLD 273
           ++    D++  R ++ER+R L + D +TGL NR+  +E +  A          + +++++
Sbjct: 507 IVGFFADLSARRESEERMRYLTHYDELTGLANRSLFRERLREAHQRVRQGGRNLALLHIN 566

Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEA 332
           LD FK +ND+ GH   DQLL+ ++  +++ L     +AR  GDEF VL       S+L  
Sbjct: 567 LDRFKLLNDSLGHEVADQLLQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLAR 626

Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSAAIIRHADTAMYTAKEGGRGQF 392
           +A+R+L +LR+P  +   E+  S S+G++L P++  + +A++  ++ AM  AK  G   F
Sbjct: 627 VATRLLAKLRVPVTVEGHELVVSASMGVSLLPDNAREISALVSQSNMAMQHAKHLGGNNF 686

Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERG 451
             +T  +     E L L+ +LRKA+E  QL + YQPK+    G++ + EAL+RW+ P+ G
Sbjct: 687 QFYTDSLQASTLERLQLENHLRKAIEEGQLTVFYQPKLCLATGKLNAAEALIRWEHPQWG 746

Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIF 510
           ++PP DFI  AEE+GLIVPLG +V+ +   Q  +W+ +G+  +RV+VN+S  QL    + 
Sbjct: 747 MVPPGDFIGLAEETGLIVPLGEFVLREACWQACEWQRQGLAPIRVSVNLSVHQLRQGKLV 806

Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570
           + ++QVL+E   +   +++ELTES L+++ E  ++  QQ   LG ++ +DDFGTGYSSLS
Sbjct: 807 SLVRQVLEETGLDPQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLS 866

Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630
            L R P+D +K+DQ F+R + +     ++ RAI+A+A  L L+V+AEGVE  ++  FL  
Sbjct: 867 YLKRIPVDYVKIDQTFIRGLGQGREDAAITRAIIAMAHGLALKVVAEGVEDQQQLDFLRG 926

Query: 631 NGINERQGFLFAKPMPA 647
              +E QG+L ++PM A
Sbjct: 927 ERCDEVQGYLISRPMEA 943