Pairwise Alignments

Query, 296 a.a., Putrescine export system permease protein SapC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  212 bits (539), Expect = 1e-59
 Identities = 114/279 (40%), Positives = 163/279 (58%)

Query: 13  PGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYG 72
           P   +  W+ F  +  A++GL     +    +F  W AP+   +Q+  + L PP W   G
Sbjct: 22  PSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGG 81

Query: 73  EVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLN 132
              F LGTD+LGRD+LSRL+ GA  ++       + + I G++LG  AG    L    + 
Sbjct: 82  TWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIM 141

Query: 133 HILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIA 192
            ++D +LA+PSLLLA+ +VA  GP L + + A+ +  LP  VR   + V  EL ++YV A
Sbjct: 142 RLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTA 201

Query: 193 ARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAML 252
           ARL GA    +++  V+PN  A L+ + T + S AILD AALGFL LG Q P+PEWG ML
Sbjct: 202 ARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTML 261

Query: 253 GDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAI 291
             A + I  A W V LPG  I++SVL +NL+GDG+R A+
Sbjct: 262 ASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDAL 300



 Score = 23.1 bits (48), Expect = 0.008
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 266 VMLPGAAIMISVLLVNLLGDGVRRAIIA 293
           VML   +++++V +V +LG G+   +IA
Sbjct: 146 VMLALPSLLLAVAIVAILGPGLINTVIA 173