Pairwise Alignments

Query, 297 a.a., Hca operon transcriptional activator HcaR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 303 a.a., LysR family transcriptional regulator YnfL from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  189 bits (481), Expect = 5e-53
 Identities = 105/273 (38%), Positives = 162/273 (59%), Gaps = 2/273 (0%)

Query: 3   IELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAA 62
           +ELRHLRYFVAVAEEL+F RAA RL I+QPPLS QI+ALE+++G +L  R  + V LT +
Sbjct: 1   LELRHLRYFVAVAEELNFTRAAERLYIAQPPLSTQIRALEEELGVQLFERDKKRVYLTQS 60

Query: 63  GKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPD 122
           G+ FL  +R IL+ V DA   A R   G+ G+L IGFT+S+   +A+   +  ++  +P 
Sbjct: 61  GRYFLERARGILASVQDAKDEAHRAATGDVGKLSIGFTASSILTQALPQAIRRYQSIHPS 120

Query: 123 VHLQTREMNTREQIAPLIEGTLDMGLLR--NTALPESLEHAVIVHEPLMAMIPHDHPLAN 180
           V L+  E+ +  Q+  +   +LD+G+LR  N  +P  +        PL+A +P  H L  
Sbjct: 121 VELKMMELASMHQLDAIHHRSLDLGVLRKPNVGVPTGVVIEEWYSAPLVAAMPQQHVLTK 180

Query: 181 NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL 240
              + + EL   P + +    G GLY  ++ L  +    P +  E  +A T+IGLV++GL
Sbjct: 181 GKGIHIGELKNVPLIVYPRDAGIGLYWKVMDLCAKAGFRPAVMHEARDASTMIGLVASGL 240

Query: 241 GVSILPASFKRVQLNEMRWVPIAEEDAVSEMWL 273
           GV+I+P   + V L  + +  I +++AVS ++L
Sbjct: 241 GVAIVPQGTQCVLLEGVLYSRILDKEAVSSLYL 273