Pairwise Alignments

Query, 341 a.a., HTH-type transcriptional repressor PurR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  244 bits (622), Expect = 3e-69
 Identities = 149/342 (43%), Positives = 200/342 (58%), Gaps = 4/342 (1%)

Query: 1   MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK 60
           MATIKDVA  A +S TTVSHV+NKTR V+E  R  V AAIK+L Y PSAVARSLK   T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60

Query: 61  SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL 120
           +IGLL  +S   YFAE+   +E  C + GY +IL N+ +N EKQR YL ++ +KR+DGL+
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLI 120

Query: 121 VMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHRE 180
           V      +  LA        PMV++D      D     ID+  EG Y+A R+L+E GHR+
Sbjct: 121 VTSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHE-EGAYLATRHLLELGHRD 179

Query: 181 IGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRP 240
           I  I GP        RLAG+ +A+ EA + V  +   + DF    GY A  Q+L++ + P
Sbjct: 180 IACIGGPAHTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTGGYTAAVQLLTE-NPP 238

Query: 241 TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGET 300
           +A+F   D++  G L AA E  +RVP ++S+IG+D+++  RY  PALTT+ Q    LGET
Sbjct: 239 SAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLGET 298

Query: 301 AFNMLLDRIVNKREEPQSIEVHPRLIERRSVAD--GPFRDYR 340
           A  +LL RI           V P ++ R S A   G F  YR
Sbjct: 299 AAELLLRRIATPHMPIDQRIVTPSIVLRESTAPVAGTFAQYR 340