Pairwise Alignments

Query, 341 a.a., HTH-type transcriptional repressor PurR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 329 a.a., Ribose operon repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  297 bits (760), Expect = 3e-85
 Identities = 152/330 (46%), Positives = 222/330 (67%), Gaps = 3/330 (0%)

Query: 4   IKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIG 63
           +KDVA+ A VST+TVSHVINK RFV+E     V AAIK L+Y+PSA+ARSLK+N T++IG
Sbjct: 1   MKDVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLNYAPSALARSLKLNQTRTIG 60

Query: 64  LLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMC 123
           +L T+S   +++E++  VE++CF++GY+L+L N   + ++    L  + QKRVDGLL++C
Sbjct: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120

Query: 124 SEYPEPLLAMLEEYRHIPMVVMDWG--EAKADFTDAVIDNAFEGGYMAGRYLIERGHREI 181
           +E  +P   ++E Y  IP V+MDW   + + D +D + DN+  GG +A +YLI++G   I
Sbjct: 121 TETHQPSREIMERYPSIPTVMMDWSPFDGEGD-SDLIQDNSLLGGDLATQYLIDKGFTRI 179

Query: 182 GVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT 241
             I GPL++     RL G+  AM+ A + +P+ + + GDFE   G+ AMQ +L+   RP 
Sbjct: 180 ACITGPLDKTPARLRLEGYRAAMKRAGLAIPQGYEITGDFEFGGGFDAMQALLAHQQRPQ 239

Query: 242 AVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETA 301
           AVF G D MA+GA  A  + GLR+PQD+ +IGYD++  ARY TP LTTIHQPKD LGE A
Sbjct: 240 AVFTGNDAMAVGAYQALYQAGLRIPQDMVVIGYDDIELARYMTPPLTTIHQPKDELGELA 299

Query: 302 FNMLLDRIVNKREEPQSIEVHPRLIERRSV 331
            ++L+ R+     + Q +++ P L  R SV
Sbjct: 300 IDVLIHRMAQPALQQQRLQLTPVLTVRGSV 329