Pairwise Alignments

Query, 421 a.a., Inner membrane transport protein YdiN from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 411 a.a., Putative transport system permease protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  710 bits (1833), Expect = 0.0
 Identities = 351/410 (85%), Positives = 388/410 (94%)

Query: 1   MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMSSLAEKFSTDNAGIAYLISGIGLG 60
           MSQNKA + P++LAV+CIYFSYFLHG+SVITLAQNM+SLA+KFSTD+AGIAYLISGIGLG
Sbjct: 1   MSQNKARNMPYLLAVICIYFSYFLHGMSVITLAQNMTSLAQKFSTDSAGIAYLISGIGLG 60

Query: 61  RLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLTLAYGLAVCVGIANSALDT 120
           RL+SILFFGV+SDKFGRRA+IL+  ++Y+LFFFGIPA PNL +A+ LAVCVG+ANSALDT
Sbjct: 61  RLVSILFFGVLSDKFGRRAIILLGAVLYMLFFFGIPASPNLMIAFILAVCVGVANSALDT 120

Query: 121 GGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYMLLNNIWYGYGLIIPGILFVLI 180
           GGYPALMECFPKASGSAVILVKAMVSFGQM YP++VS +L+N+IWYGY ++IPGILFVLI
Sbjct: 121 GGYPALMECFPKASGSAVILVKAMVSFGQMIYPLIVSALLVNHIWYGYAVVIPGILFVLI 180

Query: 181 TLMLLKSKFPSQLVDASVTNELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYA 240
           TLMLLKS+FPSQLVDAS+  ELPQMNS PLVWLEGV+SVLFGVAAFSTFYVIVVWMPKYA
Sbjct: 181 TLMLLKSRFPSQLVDASIAKELPQMNSTPLVWLEGVASVLFGVAAFSTFYVIVVWMPKYA 240

Query: 241 MAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANVFNSALATITAAIIYLY 300
           MAFAGM+E++ALKTISYYSMGSLVCVFIFAALLKKMVRPIWANVFN+ LATITAA IYLY
Sbjct: 241 MAFAGMAESDALKTISYYSMGSLVCVFIFAALLKKMVRPIWANVFNAGLATITAAAIYLY 300

Query: 301 PSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITG 360
           PSPL+CNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGG+ANF+IPLITG
Sbjct: 301 PSPLICNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGVANFLIPLITG 360

Query: 361 YLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKF 410
           YLS IGLQYII+LDF FALL  ITAIIVFIRYYRVF IP+NDVRFGE  F
Sbjct: 361 YLSTIGLQYIILLDFAFALLTFITAIIVFIRYYRVFKIPQNDVRFGEHYF 410