Pairwise Alignments

Query, 326 a.a., IS110 family transposase IS621 from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 352 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  112 bits (281), Expect = 1e-29
 Identities = 76/296 (25%), Positives = 146/296 (49%), Gaps = 14/296 (4%)

Query: 33  FANTTKGHDELVSWLKGHKIDHAHIC--IEATGTYMEPVAECLYDAGYIVSVINPALGKA 90
           F N   G  +L+ W + HK     I   +EATG Y E +A  L+     V+++ P     
Sbjct: 38  FKNKPTGFVKLLKWAEKHKTAEGEILFVMEATGVYHEKLAHWLHGQSRKVAIVLPNKISN 97

Query: 91  FAQSEGLRNKTDTVDARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQALT-------- 142
           ++++  ++  TD   A  +A F  ++    W  P  L R ++ L    + +         
Sbjct: 98  YSKTLDVKTVTDKTAAEAIARFGLERHLETWLPPKQLFREIKQLTREREQIVAERVVIKN 157

Query: 143 DMHTQELNRTETAREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIP 202
            +H +++        ++R  +++ L  L  +   ++ +I+ L + D  +K     + SIP
Sbjct: 158 QLHAEKVQAFPNKNSIKR--LNSRLRLLNKQEAEIKTEIRQLINQDQKVKQDVANMTSIP 215

Query: 203 GIGEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSKAGHVSLRRA 262
           G+GE T+A++LA     +   + RQ A++AG   +  +SG SV+G  ++SK G+  LR+A
Sbjct: 216 GVGELTAAIVLAETNGFELIKNKRQLASYAGFDVKEKQSGISVKGKPKISKKGNRYLRKA 275

Query: 263 LYMPAMVATSKTE-WGRAFRDRLAANGKKGKVILGAMMRKLAQVAYGVLKSGVPFD 317
           +++PA+ A    E +   +   +  +G K K ++ A+ RK+ ++ Y + K+   FD
Sbjct: 276 VHLPALSAVKHCEQYKNTYARLVGRHGIKMKALV-AVQRKILELMYILYKTETVFD 330