Pairwise Alignments

Query, 481 a.a., Ribosomal RNA small subunit methyltransferase F from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 513 a.a., Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  847 bits (2187), Expect = 0.0
 Identities = 407/479 (84%), Positives = 442/479 (92%)

Query: 3   VAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPY 62
           VAQH VYFPDAFLTQMREAMPSTLSFD+F++ACQRPLRRSIR+NTLKISVADFL L APY
Sbjct: 35  VAQHAVYFPDAFLTQMREAMPSTLSFDEFISACQRPLRRSIRINTLKISVADFLALIAPY 94

Query: 63  GWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQR 122
           GW+LTPIPWC EGFWIERD+E+ALPLGSTAEHLSGLFYIQEASSMLPVAALFAD N PQR
Sbjct: 95  GWSLTPIPWCHEGFWIERDDEEALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNHPQR 154

Query: 123 VMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF 182
           VMD+AAAPGSKTTQIAARM N GAILANEFSASRVKVLHANISRCGI+N ALTHFDGRVF
Sbjct: 155 VMDMAAAPGSKTTQIAARMGNRGAILANEFSASRVKVLHANISRCGIANTALTHFDGRVF 214

Query: 183 GVAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGG 242
           G A+PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN +IAATQREL+DSAFHALRPGG
Sbjct: 215 GAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNLDIAATQRELLDSAFHALRPGG 274

Query: 243 TLVYSTCTLNREENEAVCMWLKETYPDAVEFLPLGELFPAANKALTEEGFLHVFPQIYDC 302
           TLVYSTCTLNR+ENEAVC+WLKETY DAVEFLPLG+LFP A++ALT EGFLHVFPQIYDC
Sbjct: 275 TLVYSTCTLNRQENEAVCLWLKETYADAVEFLPLGDLFPDADRALTPEGFLHVFPQIYDC 334

Query: 303 EGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAAAGVGLNWDENLRLWQR 362
           EGFFVARLRK  ++PA+PAP YKVG FPF+P+K REA  + QAA  VGL WDENL LWQR
Sbjct: 335 EGFFVARLRKMSSLPAMPAPGYKVGAFPFTPLKGREALHVTQAANAVGLLWDENLHLWQR 394

Query: 363 DKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALATPDNVNAFELTPQE 422
           +KE+WLFP  IE+LIGKVRFSRLGIKLAE+HNKGYRWQHEA IALA P + +AFEL+ QE
Sbjct: 395 EKEVWLFPAEIESLIGKVRFSRLGIKLAESHNKGYRWQHEATIALACPTHAHAFELSVQE 454

Query: 423 AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTSNA 481
           AEEWYRGRD+YPQ  P ADDVLVTFQHQP+GLAKRIG+R+KNSYPRELVRDGKLFT N+
Sbjct: 455 AEEWYRGRDIYPQTPPAADDVLVTFQHQPLGLAKRIGARIKNSYPRELVRDGKLFTGNS 513