Pairwise Alignments

Query, 481 a.a., Ribosomal RNA small subunit methyltransferase F from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 465 a.a., tRNA and rRNA cytosine-C5-methylases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  172 bits (435), Expect = 3e-47
 Identities = 137/482 (28%), Positives = 226/482 (46%), Gaps = 40/482 (8%)

Query: 2   LVAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAP 61
           + +Q +   P AF  QM   + +   +  F AA   P   SIR+N  K S         P
Sbjct: 1   MTSQDSPKLPKAFEQQMASILEAD-EYSLFKAALLSPSNTSIRINPRKSS---------P 50

Query: 62  YGWTLTPIPWCEEGFWI-ERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAP 120
                TP+PW  +GF++ +R      PL       +G +Y+QEASSM  +  +     AP
Sbjct: 51  LSADTTPVPWNSQGFFLPQRPKFTFDPLFH-----AGAYYVQEASSMF-IGHILNHLQAP 104

Query: 121 QR--VMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFD 178
           +    +D+ AAPG K++ +A  +  EG ++ANE   +R  +L  N+ + G+ N  +T+ D
Sbjct: 105 KEGLYLDLCAAPGGKSSLLADYIGEEGMLVANEVIKTRASILKENMIKWGLGNTVVTNND 164

Query: 179 GRVFGVAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHAL 238
              F   +  +FD +L+DAPCSGEG+ RKD  A + WSPE+ +  AA Q+ ++D      
Sbjct: 165 PSHFE-PLEGLFDVVLVDAPCSGEGMFRKDVQAREEWSPENVKLCAARQQRILDQTGALP 223

Query: 239 RPGGTLVYSTCTLNREENEAVCMWLKETYPDAVEFLPLG-ELFPAANKALTEEGFLH--- 294
            P G L+YSTCT N++ENE +  +L E +      +PL  +      +  TE G  +   
Sbjct: 224 GPEGYLIYSTCTFNQQENEDMIRFLTEEFAYEPVRIPLNPDWGIVETETDTEWGTFYGYR 283

Query: 295 VFPQIYDCEGFFVARLRKTQAIPALPAPKYK-VGNFPFSPVKDREAGQIRQAAAGVGLNW 353
            FP +   EG F+   ++          K K   +         E  Q+R+      L  
Sbjct: 284 FFPHMVSGEGLFITVFKRPSDAHVQEPKKMKDFKHILLQRTNKAEKHQLREE-----LKL 338

Query: 354 DENLRLWQRDKELW----LFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALAT 409
           DE +  ++  K  +     +    E L   +     G +L + +   +   H+  +++  
Sbjct: 339 DETVDFYKLKKSFFALKGFWAKYFELLATTLNVKYFGTELGKFNKGQFIPTHDFAVSI-L 397

Query: 410 PDNVNAFELTPQEAEEWYRGRDVYPQAAPVADD--VLVTFQHQPIGLAKRIGSRLKNSYP 467
           P N    E + + A  + +  ++      ++ D  VL+T+QH P+G  K IG+R+ N YP
Sbjct: 398 PKNFPKHEASLEAAHSYLKKDEL---ELDISQDGWVLLTYQHLPLGWIKNIGNRINNYYP 454

Query: 468 RE 469
           +E
Sbjct: 455 KE 456