Pairwise Alignments

Query, 481 a.a., Ribosomal RNA small subunit methyltransferase F from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 479 a.a., 16S rRNA m(5)C1407 methyltransferase, SAM-dependent from Escherichia coli BL21

 Score =  955 bits (2469), Expect = 0.0
 Identities = 469/479 (97%), Positives = 473/479 (98%)

Query: 3   VAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPY 62
           +AQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPY
Sbjct: 1   MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPY 60

Query: 63  GWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQR 122
           GWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFAD NAPQR
Sbjct: 61  GWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNAPQR 120

Query: 123 VMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF 182
           VMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF
Sbjct: 121 VMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF 180

Query: 183 GVAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGG 242
           G AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGG
Sbjct: 181 GAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGG 240

Query: 243 TLVYSTCTLNREENEAVCMWLKETYPDAVEFLPLGELFPAANKALTEEGFLHVFPQIYDC 302
           TLVYSTCTLN+EENEAVC+WLKETYPDAVEFLPLG+LFP ANKALTEEGFLHVFPQIYDC
Sbjct: 241 TLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDC 300

Query: 303 EGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAAAGVGLNWDENLRLWQR 362
           EGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAAA VGLNWD NLRLWQR
Sbjct: 301 EGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAAASVGLNWDGNLRLWQR 360

Query: 363 DKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALATPDNVNAFELTPQE 422
           DKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALATPDNVNAFELTPQE
Sbjct: 361 DKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALATPDNVNAFELTPQE 420

Query: 423 AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTSNA 481
           AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFT NA
Sbjct: 421 AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGNA 479