Pairwise Alignments

Query, 336 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 345 a.a., Holliday junction DNA helicase, RuvB subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  371 bits (953), Expect = e-107
 Identities = 183/313 (58%), Positives = 240/313 (76%)

Query: 20  DRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEM 79
           ++A+RP   +++ GQ ++   +++F+ AAK RG++LDH+L+ GPPGLGKTTL++I+ANE+
Sbjct: 21  EKALRPLSFDDFTGQQKIVDNIQVFVMAAKKRGESLDHVLLHGPPGLGKTTLSHIIANEL 80

Query: 80  GVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMI 139
             +L+ TSGPVL+K  DLA +LTNLE  DVLFIDEIHRL+ VVEE LY AMED+++DIM+
Sbjct: 81  ESSLKITSGPVLDKPSDLAGLLTNLEEGDVLFIDEIHRLNAVVEEYLYSAMEDFRIDIML 140

Query: 140 GEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARF 199
             GP ARS++I L PFTLIGATTR+G LTSPLR RFGI  RLE+Y    L  IV+RSA  
Sbjct: 141 DSGPNARSVQISLNPFTLIGATTRSGLLTSPLRARFGINARLEYYDAKLLTTIVTRSANI 200

Query: 200 MGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAE 259
           +G  + +  A E+ARR+RGTPRIAN LLRR RDFA++K +GTI+ DIA  ALD L+VD  
Sbjct: 201 LGAPIDEVAAYEIARRSRGTPRIANTLLRRTRDFADIKGNGTITLDIAKVALDALDVDEN 260

Query: 260 GFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRM 319
           G D MD ++L  +I+KF GGPVG+  +A A GEE ETIE+V EP+LIQ+G+L+RT RGR+
Sbjct: 261 GLDEMDNRILTTIIEKFKGGPVGISTIATACGEEGETIEEVYEPFLIQEGYLKRTSRGRI 320

Query: 320 ATTRAWNHFGITP 332
           AT  A+ H  I P
Sbjct: 321 ATELAYKHLNIRP 333