Pairwise Alignments

Query, 553 a.a., Methyl-accepting chemotaxis protein II from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 553 a.a., Methyl-accepting chemotaxis protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  823 bits (2127), Expect = 0.0
 Identities = 438/554 (79%), Positives = 478/554 (86%), Gaps = 2/554 (0%)

Query: 1   MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLM 60
           M NRIRVVT+L+MVLGVFALLQL+SG L FSSL H+Q+ FV+SN+LR+QQ ELTSTWDLM
Sbjct: 1   MFNRIRVVTMLMMVLGVFALLQLVSGGLLFSSLQHNQQGFVISNELRQQQSELTSTWDLM 60

Query: 61  LQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATS 120
           LQTRINLSRSA RMMMD+SNQQS+AK +LL +A+ TLAQAA HY  FK+M PLP M   S
Sbjct: 61  LQTRINLSRSAARMMMDASNQQSSAKTDLLQNAKTTLAQAAAHYANFKNMTPLPAMAEAS 120

Query: 121 RNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIV 180
            N+DEKY+ Y  AL ELI +LD GN  AYFAQPTQGMQNA+GEA   YA  SE LYR   
Sbjct: 121 ANVDEKYQRYQAALAELIQFLDNGNMDAYFAQPTQGMQNALGEALGNYARVSENLYRQTF 180

Query: 181 TDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLT 240
             +A DYRFAQWQL V+A+V+VLIL+V W+GIR  LL PLA++I HIREIA G+L  TLT
Sbjct: 181 DQSAHDYRFAQWQLGVLAVVLVLILMVVWFGIRHALLNPLARVITHIREIASGDLTKTLT 240

Query: 241 IDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASAL 300
           + GR+E+G+LA +V HMQRSL DTVT VREGSDAIY+GT EIAAGNTDLSSRTEQQASAL
Sbjct: 241 VSGRNEIGELAGTVEHMQRSLIDTVTQVREGSDAIYSGTSEIAAGNTDLSSRTEQQASAL 300

Query: 301 EETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIA 360
           EETAASMEQLTATVKQNADNARQASQLAQSAS+TA+HGGKVVDGVV TMHEIADSSKKIA
Sbjct: 301 EETAASMEQLTATVKQNADNARQASQLAQSASETARHGGKVVDGVVNTMHEIADSSKKIA 360

Query: 361 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIE 420
           DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIE
Sbjct: 361 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIE 420

Query: 421 DSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDR 480
           DSVSRVDTGSVLVESAGETM +IVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDR
Sbjct: 421 DSVSRVDTGSVLVESAGETMTDIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDR 480

Query: 481 VTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAASPL-TNKPQTPSRPASEQPPAQP 539
           VTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLA+ PL  NKP+      + Q    P
Sbjct: 481 VTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLASRPLAVNKPEM-RLSVNAQSGNTP 539

Query: 540 RLRIAEQDPNWETF 553
           +   A  D NWETF
Sbjct: 540 QSLAARDDANWETF 553