Pairwise Alignments

Query, 553 a.a., Methyl-accepting chemotaxis protein II from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 553 a.a., methyl-accepting chemotaxis protein from Escherichia coli ECOR38

 Score =  587 bits (1513), Expect = e-172
 Identities = 324/556 (58%), Positives = 407/556 (73%), Gaps = 6/556 (1%)

Query: 1   MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLM 60
           M+ RI++VT L++VL VF LLQL SG LFF++L + +++F V   +R+QQ  L  +W  +
Sbjct: 1   MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQTIRQQQSTLNGSWVAL 60

Query: 61  LQTRINLSRSAVRMMMDSSNQQSNAKV-ELLDSARKTLAQAATHYKKFKSMAPLP-EMVA 118
           LQTR  L+R+ +R MMD +N  S + V EL+ SA  +L QA  ++  ++++   P +  A
Sbjct: 61  LQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAEKNWADYEALPRDPRQSTA 120

Query: 119 TSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRD 178
            +  I   Y  Y+ AL ELI  L  G    +F QPTQG Q+   + +  Y   +++LY  
Sbjct: 121 AAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQDGFEKQYVAYMEQNDRLYDI 180

Query: 179 IVTDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANT 238
            V+DN   Y  A W L  + +VV+ ++L  W+GI+  L+ P+ ++I  IR IAGG+L   
Sbjct: 181 AVSDNNASYSQAMWILVGVMIVVLAVILAVWFGIKASLVAPMNRLIDSIRHIAGGDLVKP 240

Query: 239 LTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQAS 298
           + +DG +EMG LA+S+ HMQ  L  TV  VR G++AIY+G  EIA GN DLSSRTEQQA+
Sbjct: 241 IEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANAIYSGASEIATGNNDLSSRTEQQAA 300

Query: 299 ALEETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKK 358
           +LEETAASMEQLTATVKQNA+NARQAS LA SAS+TAQ GGKVVD VV+TM +I+ SS+K
Sbjct: 301 SLEETAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQK 360

Query: 359 IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKAL 418
           IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLA RSAQAA+EIK+L
Sbjct: 361 IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSL 420

Query: 419 IEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEM 478
           IEDSV +VD GS LVESAGETM  IV+AVTRVTDIMGEIASASDEQSRGIDQV LAV+EM
Sbjct: 421 IEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEM 480

Query: 479 DRVTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQ 538
           DRVTQQNA+LV+ES AAAAALEEQASRLT+AV+ FR+       + +  S       PA 
Sbjct: 481 DRVTQQNAALVEES-AAAAALEEQASRLTEAVAVFRIQQQ--QQQQREASAVVKTVTPAT 537

Query: 539 PR-LRIAEQDPNWETF 553
           PR + +A+ + NWETF
Sbjct: 538 PRKMAVADSEENWETF 553