Pairwise Alignments

Query, 240 a.a., Regulatory protein SdiA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 235 a.a., transcriptional regulator, LuxR family from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 1e-33
 Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 10/237 (4%)

Query: 9   WRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68
           W+   L  F    + ++++      AQ L+ DY  L +R  +    P++  Y+NYP  W+
Sbjct: 4   WKPEYLRAFVSERSPQKLFDIAVHLAQDLDMDYLGLNIRIQIATQTPRLYLYSNYPSEWI 63

Query: 69  SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128
             YQ  +F   DP  N  + S   ++W D+L+ EA    E A  +GLR G TQ L     
Sbjct: 64  ERYQRDDFYKQDPAANLSHSSTMPVLWTDELYKEAPQFREMACLYGLRHGWTQSLHDQQH 123

Query: 129 ALGFLSFSRSSAREIPILSDELQL-----KMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183
               +S +R +    PI  DE++L      +Q L       L   +   +  P+   S+R
Sbjct: 124 NESQISVARPNG---PI--DEVELYDKAGSVQWLCHTLHAVLGEHHLNALCPPQPKMSER 178

Query: 184 EKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240
           E E+LKW+A GKT+A++A ILS+S++TVNFH +++  K NA NK      AA  G I
Sbjct: 179 ELEVLKWSAAGKTAADVASILSLSQSTVNFHIRSVITKTNAANKAGAIAIAALRGWI 235