Pairwise Alignments

Query, 240 a.a., Regulatory protein SdiA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 240 a.a., N-3-oxohexanoyl-L-homoserine lactone quorum-sensing transcriptional activator @ N-3-oxooctanoyl-L-homoserine lactone quorum-sensing transcriptional activator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  365 bits (936), Expect = e-106
 Identities = 174/240 (72%), Positives = 204/240 (85%)

Query: 1   MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60
           MQ+ DFF+WRR MLLRFQ M AAE+VY E++ Q Q+LE+DYY+LCVRHPVPFTRPK++  
Sbjct: 1   MQENDFFTWRRAMLLRFQEMAAAEDVYTELQYQTQRLEFDYYALCVRHPVPFTRPKISLR 60

Query: 61  TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120
           T YP AWV++YQ++N+ AIDPVL PENF QGHL W+D LF EA+ +W+AA+  GLRRGVT
Sbjct: 61  TTYPPAWVTHYQSENYFAIDPVLKPENFRQGHLHWDDVLFHEAKAMWDAAQRFGLRRGVT 120

Query: 121 QYLMLPNRALGFLSFSRSSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180
           Q +MLPNRALGFLSFSRSS R      DE++L++QLL RESL AL R  D++VM PEM F
Sbjct: 121 QCVMLPNRALGFLSFSRSSLRCSSFTYDEVELRLQLLARESLSALTRFEDDMVMAPEMRF 180

Query: 181 SKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240
           SKREKEILKWTAEGKTS+EIA+ILSISENTVNFHQKNMQKK NAPNKTQ+ACYAAATGLI
Sbjct: 181 SKREKEILKWTAEGKTSSEIAIILSISENTVNFHQKNMQKKFNAPNKTQIACYAAATGLI 240