Pairwise Alignments

Query, 240 a.a., Regulatory protein SdiA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 240 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

 Score =  478 bits (1231), Expect = e-140
 Identities = 236/240 (98%), Positives = 237/240 (98%)

Query: 1   MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60
           MQD DFFSWRRTMLLRFQRME AEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY
Sbjct: 1   MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60

Query: 61  TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120
           TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT
Sbjct: 61  TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120

Query: 121 QYLMLPNRALGFLSFSRSSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180
           QYLMLPNRALGFLSFSR SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF
Sbjct: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180

Query: 181 SKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240
           SKREKEIL+WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
Sbjct: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240