Pairwise Alignments

Query, 445 a.a., NADH-quinone oxidoreductase subunit F from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 457 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  342 bits (878), Expect = 1e-98
 Identities = 180/413 (43%), Positives = 256/413 (61%), Gaps = 19/413 (4%)

Query: 26  LDEYRSKNGYEGARKAL-------------TGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72
           L +Y ++ GY+  RK L              G++ D+++  +K++ L+GRGGAGF TGLK
Sbjct: 39  LKDYVARGGYQALRKVLGQDGSPPAGDPPVVGMTQDQVIATLKESALRGRGGAGFPTGLK 98

Query: 73  WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132
           WS MP+ +    +YL+CN+DE EPGT KDR ++   PH+++EGM I+A+A+    GY ++
Sbjct: 99  WSFMPR-QFPGQKYLVCNSDEGEPGTCKDRDILLYNPHIVIEGMAIAAYAMGISVGYNYI 157

Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192
            GE  EA      A+ EA  AG LG  IMG+GF+F+L    G G YICGEETAL+ SLEG
Sbjct: 158 HGEIFEAYERFEAALEEARAAGFLGDGIMGSGFNFQLHAAHGFGAYICGEETALLESLEG 217

Query: 193 RRANPRSKPPFPATSGVWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252
           ++  PR KPPFPA+ G++GKPT +NN ET   VP I+ NG   Y    K  + GTK+   
Sbjct: 218 KKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGAAYLACGKPNNGGTKIYSV 277

Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH--LDLPME 310
           SG V+ PG +E+P GT   ++LE  AGG+R G   KA  PGG+    L  AH  ++  M+
Sbjct: 278 SGDVEMPGNYEVPLGTPFSKLLE-LAGGVRKGRTLKAVIPGGSSAPVL-PAHIMMECTMD 335

Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370
           ++SI KAGS LG+   + +D    MV  ++ L  F+  ESCG CTPCR+G  W  +++  
Sbjct: 336 YDSIAKAGSMLGSGAVIVMDDSRCMVESLKRLSYFYMHESCGQCTPCREGTGWLWRMVDR 395

Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423
           ++RGEG+P D+  L+ +   +  G+T CA    A  P+++ IK+FR EFEA I
Sbjct: 396 IDRGEGKPADMALLDNVAENI-MGRTICALGDAAAMPVRAMIKHFRHEFEAKI 447