Pairwise Alignments

Query, 1197 a.a., Sensor protein EvgS from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 1204 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  451 bits (1161), Expect = e-130
 Identities = 333/1181 (28%), Positives = 559/1181 (47%), Gaps = 40/1181 (3%)

Query: 2    KFLPYIFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDP--LRLSNKELRWLASKKNLV 59
            + L +  +L  GL+S  + A +   E   +      TL+   L L   + RWL  ++ LV
Sbjct: 5    RLLRFTAILLIGLFSPAAMALD---EPHTLQLLGHATLENPGLELDESDWRWLRQRRTLV 61

Query: 60   IAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYADHQKAMDALAEGEVD 119
            + V     A      + +   GI ADY  L+   L++ + +R Y    + ++AL  G+VD
Sbjct: 62   MGVSAPDYAPF-DLSNNKDFEGITADYAWLISLILSVPIEVRRYDTRDEVIEALKLGQVD 120

Query: 120  IVLSHLVTSPPLNNDIAATKPLIITF------PALVTTLHDSMRPLTSPKPVNIARVANY 173
            +V S        N   AA K L+++       P L+T   DS           +A + +Y
Sbjct: 121  LVGS-------ANGYEAADKGLVLSRSYANDQPVLITRAGDSHLLSADLAGKRVAMLYHY 173

Query: 174  PPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNVVKY 233
               + +   +PKA ++ + + +QA+ SV+ G  D ++G  I    +I +   +++ +  +
Sbjct: 174  MQPDAVQAYYPKAQLLLYGSTHQAIGSVAFGQADVYLGDIISARYLIKKNHLNNIRMADF 233

Query: 234  YNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEH 293
                     F    +++ L  ++N  +  +    +  + + W    +       L L++ 
Sbjct: 234  SGLEVNPFGFAFTADNIRLLNIINAALAVIPASQQMSILRRWSAADSGVLEADRLRLSDS 293

Query: 294  EKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSHNIH 353
            E++W+++HP +KV       P S  DE G   G+  ++L+ I+L+TGL F  +  +    
Sbjct: 294  EQRWLEKHPRVKVAVLDKFMPLSFLDERGQFVGLSDEVLSRISLRTGLKFEMVHGNSLTR 353

Query: 354  AGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVMQKAPDSEQTLKK--GMKVA 411
               ++S G  D++     S +R   V F   +++ PYV V + + +   TL+   G ++A
Sbjct: 354  QIDEVSSGQADMLAVITPSVERAEKVRFTRPYLSNPYVLVARASDERLLTLEDMPGKRLA 413

Query: 412  IPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPNEL 471
                  L +Q+   YP ++++ V N  AA   V +G +DA + + +++RYMI   Y + L
Sbjct: 414  FIGGNSLGAQIARDYPGIQFVDVGNPEAAMDLVAKGSVDATIVSLISARYMIARNYRDRL 473

Query: 472  YHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTIDTWDL 531
                  G   A ++F   R + EL  I+ KAL +I P E+  L+ +W     +    W  
Sbjct: 474  RITSTIGTEPARIAFGVNRSQLELYSILEKALLSITPEEMDELSNRWRSEIIIDDSYWSS 533

Query: 532  YSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYV 591
            +         L+ LL+  +L W  YL   + +R   +  L +Q+ F   L D  P+P YV
Sbjct: 534  HRNVIIQGFGLAALLLLVTLGWVLYLRNLIHKRAQAEQALSDQMRFMSVLIDGTPHPIYV 593

Query: 592  VNWQGNVISHNSAFEHYFTV---DYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTI 648
             + QG +++ N+A+   F     D     ++  +  + P    F +A  ++   +    I
Sbjct: 594  RDRQGRLMACNNAYLDVFGFKLEDVIGKTVVQTDTGNPPQAQSF-HADYLSLMERGEPQI 652

Query: 649  YTQVFEIDNGIEKRCINHWHTLCNLPASDNAVY--ICGWQDITETRDLINALEVEKNKAI 706
              +V ++  G     +  +  +     S+ AV   I GW D++E + L+  L+  K +A 
Sbjct: 653  QDRVLKVPGG---GVLTIYQWMLPYRDSNGAVVGMIAGWVDVSERQRLLGQLQEAKEEAD 709

Query: 707  KATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIG 766
             A  AK+ FLATMSHEIRTP+++++G +EL   +        +A+ +A    +S+L LIG
Sbjct: 710  AANRAKTTFLATMSHEIRTPMNAVIGMIELAQKNAEQGRVDQDALEVASMASRSMLELIG 769

Query: 767  EILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPEHYLVKIDP 826
            +ILD+ +IE+G+  L  +  ++  L+ +    F  +A  K + L           V IDP
Sbjct: 770  DILDIARIETGHLSLSLEQANLHELLASVARVFEGLARDKGLLLQVELDPMIDRAVLIDP 829

Query: 827  QAFKQVLSNLLSNALKFTTEGAVKI-TTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLF 885
              FKQV+SNLL NA+KFT  G V++   S   +  +H  +++ + D+G G+S E+QQ+LF
Sbjct: 830  LRFKQVVSNLLGNAIKFTATGQVRLGAQSTPTLAGDHLSLRLCVEDTGIGISAEDQQRLF 889

Query: 886  KRYSQTSAGRQ--QTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVA 943
              + Q S   Q  ++GSGLGL+I + L + M G L L S  G GT   +T+   ++   A
Sbjct: 890  SPFIQGSNNDQSARSGSGLGLVISRNLCEMMGGQLHLSSVLGKGTRVDLTL--TLATATA 947

Query: 944  TVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHY 1003
            T       P      L++L+ DD+P NRLLL RQL+ LG+ +  A DG +         +
Sbjct: 948  TPVYAPAPPAPATHALNLLVVDDYPANRLLLARQLSFLGHRIVTAEDGAEGFALWQDGQF 1007

Query: 1004 DLLITDVNMPNMDGFELTRKLR---EQNSSLP--IWGLTANAQANEREKGLSCGMNLCLF 1058
            D +ITD NMP MDG+ L R +R    Q   +P  + G TANAQ  E E+    GM+ CLF
Sbjct: 1008 DGVITDSNMPIMDGYTLARDIRAQERQRGLVPCLLLGFTANAQPEETERCRQAGMDGCLF 1067

Query: 1059 KPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLP 1118
            KP  LD L+T L+               D+  L   T  D   + E+L        +D  
Sbjct: 1068 KPTGLDDLRTALASRTAAPEEKEVVPVCDLSTLVALTGGDTAGLNELLAPLLDSLAEDRL 1127

Query: 1119 AAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLE 1159
                     D    H   HR+ G A ++  Q L+     LE
Sbjct: 1128 VLSTLRARTDFGKLHDLAHRVKGGARMVKSQALVACCETLE 1168